Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1362 ATGGAAGAGACTTTATCCCCGGATAGTGGGAACCATTTCCCTCGAGTGCATTGCTCTTCCTTTTGTCTGCCTAAGAATCAGGCAGCAGGTAGCACCGCCCTGGCTTCGCAGCCGGCAGACAAGTGGCACCCAACATGCATGATGCACGATCGTCATGGCTCAGTGCTCGCTTCCACTATGGCTTCTTCTTCCTCTGATGCTGGCAAGTCCGAAGTTGGTTGTGGCAGTAGAGGCGGCGGCGGCGCAGAGACTTCGGAAGCGGTGATGACGAACGATCAGCTTTTACTATACAGTGGATTGAAGAAAGCGAAGAAAGAGAGAGGATGTACAGCCAAAGAGCGCATCAGCAAAATGCCTCCTTGTGCTGCCGGGAAACGCAGCTCCATATATCGTGGTGTCACCAGACATAGATGGACTGGTCGTTATGAAGCACATCTTTGGGATAAAAGTACATGGAACCAAAACCAGAATAAGAAGGGAAAGCAAGGGGCTTATGATGATGAGGAGGCTGCAGCCAGAGCGTATGACCTTGCTGCTCTAAAATATTGGGGACCAGGGACTCTCATTAATTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATGTTTCAAGAGAAGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCCAGCCGATGGGAATCATCATATGGTCGAATGGCTGGATCCGACTACTTCCATAGTATACATTATGGTGCGGGCGATGATTCGGCTCCAGAAAGTGATTATGTAAGTGGTTTCGGTGTAGACAAAAAAATTGATCTAACAAGTCACATCAAGTGGTGGGGATCTAATAAAAGTCGCCTACCTGAAGTTGGAACAAAATCATCAGAAGGAAAAAAGCGTGGTTTTGCTGGAGATTGTTCCAGTGAAGTCAAAACATTGCAACAGGAAGTCCAACCAACTGAACCATACCAGATGCCACAGTTAGGCATGACCCATGATCAAAAGAAGCACAGAAATTCTTCAGTTTCTGCCTTAAGTATCTTGTCACGATCAGCTGCTTACAAGAGCTTGCAAGAGAAAGCATCAAAGAGACAGGAAAATAGTACTGATTATGATGAAAATGAAAACAAAAATACCATCAATAAGTTGGACCATGGCAAGGCAGTCGAGAAATCATTAAATCACGAGGGTGGCAATGAAAGACCTGACGCAGCAATGGGAATGAGCGGGGCATTGACTCTTCAAAGAAATGTTTACCCATTGGCTCCATTCTTGTCTGCGCCACTTTTGACAGCTTATAATACTGTTGATCCCTTAGTAGATCCTGCACTCTGGACGTCTCTTGTTCCTATACTTCCTGCTGACCTTTCTCGCACAGCTGAGGTTACGAAGACAGAGACCAGTTCAACTTATACCATCTTCCCACCGGAAGAGTGA 1452 0.458 MEETLSPDSGNHFPRVHCSSFCLPKNQAAGSTALASQPADKWHPTCMMHDRHGSVLASTMASSSSDAGKSEVGCGSRGGGGAETSEAVMTNDQLLLYSGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWESSYGRMAGSDYFHSIHYGAGDDSAPESDYVSGFGVDKKIDLTSHIKWWGSNKSRLPEVGTKSSEGKKRGFAGDCSSEVKTLQQEVQPTEPYQMPQLGMTHDQKKHRNSSVSALSILSRSAAYKSLQEKASKRQENSTDYDENENKNTINKLDHGKAVEKSLNHEGGNERPDAAMGMSGALTLQRNVYPLAPFLSAPLLTAYNTVDPLVDPALWTSLVPILPADLSRTAEVTKTETSSTYTIFPPEE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1362 483 SMART rav1_2 129 198 IPR001471 GO:0003700|GO:0006355
Glsi11g1362 483 MobiDBLite consensus disorder prediction 317 347 - -
Glsi11g1362 483 Pfam AP2 domain 129 184 IPR001471 GO:0003700|GO:0006355
Glsi11g1362 483 MobiDBLite consensus disorder prediction 317 332 - -
Glsi11g1362 483 MobiDBLite consensus disorder prediction 58 85 - -
Glsi11g1362 483 SUPERFAMILY DNA-binding domain 128 193 IPR016177 GO:0003677
Glsi11g1362 483 FunFam AP2-like ethylene-responsive transcription factor 128 194 - -
Glsi11g1362 483 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Glsi11g1362 483 PRINTS Ethylene responsive element binding protein signature 174 194 IPR001471 GO:0003700|GO:0006355
Glsi11g1362 483 MobiDBLite consensus disorder prediction 362 392 - -
Glsi11g1362 483 ProSiteProfiles AP2/ERF domain profile. 129 192 IPR001471 GO:0003700|GO:0006355
Glsi11g1362 483 Gene3D AP2/ERF domain 129 194 IPR036955 GO:0003700|GO:0006355
Glsi11g1362 483 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 76 367 - -
Glsi11g1362 483 MobiDBLite consensus disorder prediction 361 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1362 Glsi-ChrGlsi11 8537695 8543461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1362 88 481 AP2-EREBP Transcription Factor Family AT2G41710 61.125 7.08e-158 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi11g1362 AP2 2.6e-09 CL0081