Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1332 ATGTTGATATGTAGTTTAAGCCTCGTTTGGGGGCAAATAAATATCTATGCTCGAATATCGACCATGGGAACTTACAGAAAGTCTCCTTTAAAGCTGGGGAAGAAAGAGCCAACCAGGGAGAAGAGCGGCCCTCATAATGCTTCATGCCAGTATCGAGGTGTTCGACAAAGAACAGGAGGCAAATGGATTGCTGAGATAGGAGAGCCGAAGAAGAGAACCAGGCTCTGGCTTGGTTCTGATCCAAAGGCAAAACTTCAGATTATAGGCAGCAATGCACAAAGTCCTCCAAAGGAACAGGATACTGGTACATCATCAGAAAAGATGCTTGAAGATCTTCAGGTGAAATCCCAGATTGATCGCCATGAGTTTCTTCAACAGCTGGGTATACTAAAAGAAGAAAGACAGTCAGAAAGAACTAATAGCTCAGGAAGTTCCAAAAAGCCCGAAGCTTGA 453 0.4393 MLICSLSLVWGQINIYARISTMGTYRKSPLKLGKKEPTREKSGPHNASCQYRGVRQRTGGKWIAEIGEPKKRTRLWLGSDPKAKLQIIGSNAQSPPKEQDTGTSSEKMLEDLQVKSQIDRHEFLQQLGILKEERQSERTNSSGSSKKPEA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1332 150 CDD AP2 49 83 IPR001471 GO:0003700|GO:0006355
Glsi11g1332 150 Gene3D AP2/ERF domain 49 84 IPR036955 GO:0003700|GO:0006355
Glsi11g1332 150 SUPERFAMILY DNA-binding domain 50 79 IPR016177 GO:0003677
Glsi11g1332 150 SMART rav1_2 50 103 IPR001471 GO:0003700|GO:0006355
Glsi11g1332 150 MobiDBLite consensus disorder prediction 127 150 - -
Glsi11g1332 150 ProSiteProfiles AP2/ERF domain profile. 50 79 IPR001471 GO:0003700|GO:0006355
Glsi11g1332 150 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 24 79 - -
Glsi11g1332 150 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1332 Glsi-ChrGlsi11 8366984 8368446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1332 26 79 AP2-EREBP Transcription Factor Family AT3G57600 70.370 2.02e-19 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2372 02 73981628 73986105 Glsi11g1332 11 8366984 8368446 CCT
Glsi11g1332 11 8366984 8368446 Glsi11g1332 11 8366984 8368446 ECH