Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1321 ATGGCAAAGAAGAAGAAAGCTAGGGTTTCTGATGAAGAAGAAATTGAATGTGAACAAGAAACGGAGCATCATAATCACAATCAAATTCCCTCCGGGAAAAAGAGCCTTTACGAGGTTCTTGGGGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAAGCATACTACAAGTTGGCATTGCGGCTCCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGAGAAATTTCAGCAATTGCAAAAAGTGATCTCAATTCTTGGGGATGAAGAGAAAAGGGCACTTTATGATCAGACTGGTTGCGTTGATGATGCTGACCTTGCTGGGGAAATTGTTCAGAATCTTCACGAGTTTTTCAGAACAATGTACAAGAAGGTCACTGAAGCTGATATCGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTGCTCTGTACAAGAAGTGCAAGGGTAATATGAAGAGGTTTTTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGTTACAAGGATATTCTTGATGGGGCTATAGCTGTGGGAGAACTAAAGGCAAGAAAAGCCTACCAGAAATGGGCAAAGCAAGTATCTGAAACCAAACCACCAACTAGTCCTTTAAGGAGGGCAAAGTCAAATAAGCAGTCAGAAACAGATCTTTATGCAATCATATCACAACGCCGAACTGAGAGGAAAGACCGGTTTGATTCTATGTTCTCGTCTCTAGTTTCAAAATATGGCGGAGGTGATATACCAGAACCCACTGAAGAAGAGTTTGAAGCTGCACAGAGAAAACTGGAAAGGCGAAGGTCCTCAAAAAAATCAAAGCAGATATCGTTGTGTGTCGCAGTCCAGTATTCTACTTTGGTTGAGTCTACCCTTTCTTCTCTCTCTTCTCAGAAGTTAGTTTAG 933 0.4137 MAKKKKARVSDEEEIECEQETEHHNHNQIPSGKKSLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGEIVQNLHEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIALYKKCKGNMKRFFCSMLCSDPKLDSHRYKDILDGAIAVGELKARKAYQKWAKQVSETKPPTSPLRRAKSNKQSETDLYAIISQRRTERKDRFDSMFSSLVSKYGGGDIPEPTEEEFEAAQRKLERRRSSKKSKQISLCVAVQYSTLVESTLSSLSSQKLV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1321 310 Gene3D DnaJ domain 18 112 IPR036869 -
Glsi11g1321 310 PRINTS DnaJ domain signature 37 55 IPR001623 -
Glsi11g1321 310 PRINTS DnaJ domain signature 72 92 IPR001623 -
Glsi11g1321 310 PRINTS DnaJ domain signature 55 70 IPR001623 -
Glsi11g1321 310 PRINTS DnaJ domain signature 92 111 IPR001623 -
Glsi11g1321 310 MobiDBLite consensus disorder prediction 202 222 - -
Glsi11g1321 310 SMART dnaj_3 34 92 IPR001623 -
Glsi11g1321 310 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Glsi11g1321 310 SUPERFAMILY Chaperone J-domain 31 115 IPR036869 -
Glsi11g1321 310 Pfam DnaJ domain 36 97 IPR001623 -
Glsi11g1321 310 CDD DnaJ 37 89 IPR001623 -
Glsi11g1321 310 MobiDBLite consensus disorder prediction 1 32 - -
Glsi11g1321 310 MobiDBLite consensus disorder prediction 1 29 - -
Glsi11g1321 310 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 283 IPR042977 -
Glsi11g1321 310 MobiDBLite consensus disorder prediction 204 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1321 Glsi-ChrGlsi11 8297704 8304377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1321 31 97 C2H2 Transcription Factor Family AT1G74250 40.278 2.29e-08 53.5