Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1320 ATGTTATCCTTTGACTGCCTAACTAGTAAGGTTGCATTTGGATCGTTGGATAACATGAAAGTAGCAGTCTACACTCTACAAGGATATTGTTGTCAACCTGATCGACTTTAGTGGTCACAAGTAATGGAGTCTCACGATGAGACAGGATGCCAGGCACCAGATCGCACCATTCTTTGCATTAACAATTGCGGCTTCTTTGGAAGGGCTGCTACGATGAATATGTGTTCAAAATGTTACAAGGACATGCTGTTGAAACAGGAACAAGCCAAACTTGCAGCATCATCTGTTGAAAACATTGTTAATGGCACCACTAGCAGCAGCAGAAAAGAGGCTGTGACTTCATGTGTAACTGATGTACAAGTTGGAACTGTGGAACTCAAGACAGTATATGCAGAAATTTCTGGGGATTCATCCTCTAGTGAGAGTTTGGAGATGAAAGTCAAGACAGGCCCCAGCAGATGTACCACTTGCCGAAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGAAACATCTTTTGTGCAATGCATCGCTATTCTGACAAACATGATTGCCCTTATGATTATCAGACTGTTGGTCAGGATGTTATAGCAAAAGCCAACCCTGTAATTAAGGCAGAAAAGCTAGAAAAAATCTAG 642 0.419 MLSFDCLTSKVAFGSLDNMKVAVYTLQGYCCQPDRLXWSQVMESHDETGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQEQAKLAASSVENIVNGTTSSSRKEAVTSCVTDVQVGTVELKTVYAEISGDSSSSESLEMKVKTGPSRCTTCRKRVGLTGFSCKCGNIFCAMHRYSDKHDCPYDYQTVGQDVIAKANPVIKAEKLEKI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1320 213 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 58 96 - -
Glsi11g1320 213 ProSiteProfiles Zinc finger AN1-type profile. 148 194 IPR000058 GO:0008270
Glsi11g1320 213 Gene3D - 41 108 - -
Glsi11g1320 213 Pfam A20-like zinc finger 57 80 IPR002653 GO:0003677|GO:0008270
Glsi11g1320 213 PANTHER AN1-TYPE ZINC FINGER PROTEIN 57 213 - -
Glsi11g1320 213 Gene3D - 131 209 IPR035896 -
Glsi11g1320 213 FunFam Zinc finger AN1-type containing 6 129 209 - -
Glsi11g1320 213 SUPERFAMILY AN1-like Zinc finger 144 208 IPR035896 -
Glsi11g1320 213 ProSiteProfiles Zinc finger A20-type profile. 53 87 IPR002653 GO:0003677|GO:0008270
Glsi11g1320 213 SMART AN1_Zf_4 154 191 IPR000058 GO:0008270
Glsi11g1320 213 SMART A20_3 56 80 IPR002653 GO:0003677|GO:0008270
Glsi11g1320 213 Pfam AN1-like Zinc finger 154 191 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1320 Glsi-ChrGlsi11 8285567 8287831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1320 46 213 C2H2 Transcription Factor Family AT3G52800 43.787 2.01e-40 134