Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1308 ATGCGGGAATCAAGAGACAGAAGGTCAAAACCCGTTGACATAGCGGCCGTATTTGCTCGGCGGCGAGCTGGTATTATTGGTGTATTAGATGAGGAAGTGGAGTCGGGTTTGCTCGGATCAACGCCAAGGCGAGTGACCACTACCTCTACGGTCGCAGGGGAAGCGATCGGGTTTGGTGCTACAGGATCTGGTGGGGGCGTCAGGGGCAGTTTTGGGACTCCAAGAGCTCGTAATCTTTACGGGTTGCCTGCTGTGGACGGGAACATTCCATCAGGAACTGCTCGGCGCGGAAGGCATCGACCTCGGCAGAGTGTGCTACCTTCTTGGTACCCAAGAACCCCTCTTCGTGATGTCACTGCGGTTGTGAGGGCAATTGAAAGGAGAGTTATTCCCTTGGGAGAAAACCAAGGCCAACAACCCGGGAGTCCATTTCCGGCGGATCAATTAGTTATTGATCCTCCTCTGTCAGTTTCTGCCGTCTCTCCAAATCCAGCCGCTGGTCTCAAGCTCCGAACACCTGCAGGCAGTAAATTGCCAAAGATTTTGGTTGATATCACGCGTCAGTCCGATGGAGAATCAGAGTTTCTCACGCCCCAAAAGAAACTCCTTAACTCTATTGATACTGTTGAGAAAGTTGTGAGAGAGGAAATACAGAAACTAAAGAGAACACCAAGTGCAAAGAAGGCAGACAGAGAAAAAAGAGTTCGTACTTTGATATTAGTGAAATCTGAAGAGTTCGTGAATGGATCATTTCAGCTAGCTTTGCTATATTCAAAATCAGATGTAGAGAATGAGTGCATGAAACCTATGAACACTGATGGCTCTAGTGAACTTGGAAAGCTGCTGTCCCCATGTAGGCATCGTCTGCTGTATATCTTGAACAAGATTAGCCCCAGTGGCAATTGCTTCATGCCATATTCATTCACCTCAACTCAATCAAAATTTCGCCTTACACCCAGTCCACTGGCCTTGCCAATTATTGGACACTTGCACCTATTGCAAACACCTCCTCATAGATCTCTGCACGAGCTCTCTAACCGTTATGGACCCTTGATTCACATCTATCTTGGGTCCATTTCCTTTGTTATTGTTTCGTCTGCGGAAATTGCTAAAGAGATCTTGAAAACCCATGAAATTTCCTTCTGTAACCGACCTGCAAATGCTGCTATTAGTTATCTAACTTACAACGCAGCTGATTTAGGGTTCGCTCCTTATGAAACCTACTGGAAGTTCATGAAGCAGCTTTGCATGTCGGAACTTCTTAATGGTCGGATGCTGGATCAGCTGCTTCCCATCAGGCAGGAAGAGATAATGTGTTTTTTGCAGATGATACAAAAGAAAGCTGAAGTGGGTGAGGGTGTCAGTGTTGGAGCTGAGATTTCACGGCTAATAAACAAAGTCTGGATCTCCAAGGAAATTGGGAAGAGGCTAAAGGAGGTTCGTGATAGGTTCGACACCGTGATTGAAAGTATCATCCAGGAGCATCAAGAGGCAAGAAATAAATCGATCACAAAGGATGCAGCAAAGGATATACTAGATGTTCTTCTAAGTATATCAGAAGATGAAAGCTCGGAAGTTAAAATTACCAGAGACAACATCAAAGCCTTTTTGACGGATATATTATTAGCTGGGACAGATACAAGTGCTGTTACCATAGAATGGTCACAAAACTGCAGCATTGCTGGTTATGACGTTCCAGGAAAAACTCGGGTATTCATTAATGCGTGGGCTATTGGGAGGAACCCAGAGCACTGGGATAATCCGCTTGATTTCCAACCGGAAAGGTTTCTTAGTAAAGATGAAAGTGGGAAGAAGAGGGAATTGGATGTGAGGGGACAGCATTATCAACTTGTGCCGTTTGGAAGTGGAAGAAGGGGATGTCCTGGAGCATCACTAGCTCTAAATGTTGTTCAGACCAGCCTTGCAGCTATGATTCAGTGCTTTGAATGGAATGCAGGAGATGGAGGGAATGGCAGTGTTGACATAGAAAAAGGACCTGAAATAACTCTTTCCAGAGCTCAACCCCTGACATGTACCCCATTACCCAGACTGTGTCCATTCCCCTCCTTCTCATTGAAAAAAAGTTTGAGAACTAGAGGCGTTGAATTTTCAAGAATAATCTGA 2124 0.4548 MRESRDRRSKPVDIAAVFARRRAGIIGVLDEEVESGLLGSTPRRVTTTSTVAGEAIGFGATGSGGGVRGSFGTPRARNLYGLPAVDGNIPSGTARRGRHRPRQSVLPSWYPRTPLRDVTAVVRAIERRVIPLGENQGQQPGSPFPADQLVIDPPLSVSAVSPNPAAGLKLRTPAGSKLPKILVDITRQSDGESEFLTPQKKLLNSIDTVEKVVREEIQKLKRTPSAKKADREKRVRTLILVKSEEFVNGSFQLALLYSKSDVENECMKPMNTDGSSELGKLLSPCRHRLLYILNKISPSGNCFMPYSFTSTQSKFRLTPSPLALPIIGHLHLLQTPPHRSLHELSNRYGPLIHIYLGSISFVIVSSAEIAKEILKTHEISFCNRPANAAISYLTYNAADLGFAPYETYWKFMKQLCMSELLNGRMLDQLLPIRQEEIMCFLQMIQKKAEVGEGVSVGAEISRLINKVWISKEIGKRLKEVRDRFDTVIESIIQEHQEARNKSITKDAAKDILDVLLSISEDESSEVKITRDNIKAFLTDILLAGTDTSAVTIEWSQNCSIAGYDVPGKTRVFINAWAIGRNPEHWDNPLDFQPERFLSKDESGKKRELDVRGQHYQLVPFGSGRRGCPGASLALNVVQTSLAAMIQCFEWNAGDGGNGSVDIEKGPEITLSRAQPLTCTPLPRLCPFPSFSLKKSLRTRGVEFSRII 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1308 707 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 620 629 IPR017972 GO:0005506|GO:0016705
Glsi11g1308 707 PANTHER CYTOCHROME P450 98A9 472 554 - -
Glsi11g1308 707 Gene3D Cytochrome P450 556 672 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 PRINTS E-class P450 group I signature 627 650 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 PRINTS E-class P450 group I signature 617 627 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 PRINTS E-class P450 group I signature 345 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 Pfam Cytochrome P450 319 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 Pfam Cytochrome P450 468 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 Pfam Cytochrome P450 555 652 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 SUPERFAMILY Cytochrome P450 311 683 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1308 707 Gene3D Cytochrome P450 308 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1308 Glsi-ChrGlsi11 8207417 8214283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1308 553 692 Cytochrome P450 AT5G06900 41.429 7.04e-28 116