Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1307 ATGGGAAGTGGAGATAGGCGAACTAATAGAGAATTTGCATACTTGGTCCGCAAAACATCCAGCACAAGCACAATTCTTTCTCAGCATCACAGGCCCCCAGGTCCTCAAATATTTGATATTCCTCCGATGGCTGAGTTTGAAGGCTCCATCCTACTAATCTTGATATTGGCTCTCTCTACCGCACTTGTTCGAGTCATACTCACCCGAAATCACAGCAAGGCTCGCCGTCCGCCCACCCCACCAGCCCTACCTCTCATTGGCCACCTCCACCTTCTTCCTCCATTACCTCACCAAGCTTTTCACAAGCTCTCCGCCCGCTATGGATCCATCGTGCAACTTTCCCTTGGCTCTGTCCCTTGCGTCATAGCTTCCACTCCTGAAACCGCCAAAGAGTTCCTCAAAACTCATGAAACTAGTTTCTCCCACAGGTTTGCAAATGGCGCCGTTGACTACTTAACATATGGATCCAAAGGCTTCTTATTCGCACCTTATGGACCCTACTGGAAGTTCATGAAGAAGATATGCATGTCTCAGCTTCTCGGAGGCCGCACCCTCGACCAACTCCTTCCGCTGAGGCGAACAGAGACGATAAGGTTTCTGAGACTTCTGAACGAGAAAGGGAAGGCAGGTGAGGTTGTTGATGTTGGAGACGAGCTCTTGACATTAACAAATAGTATTATATCAAGAATGATTATGAGCCGAACGTGCTCTGGAAACGATAAAGAAGCCCGAGACATCAGGAAGTTGGTGACAGACACAGCGGAGCTTACAGGGAAGTTCAATATTTCTGACTATATTTGGTTCTTTAAGAACTTGAATTTGCAGGGATTCGACAAAAGGCTCAAGGAAATTCGGGACAGGTTTGACACCATGATGGAGAGGACGATAAAGGAGCATGAGGAGGAGAGGAGGAATAGGAAGGAACTGGGTGAAGGGGGTCAAATAAGGGATCTACTTGATATTTTACTGGACATACATGAAGATGAGAGCTCTGAGATAATTTTGAGCAGAGACAACATCAAGGCTTTCGTCATGGACTTATTCATGGCAGGAACTCACACATCTGCCATAACCACCGAATGGGCCCTAGCTGAGTTAATCAACCACCCTCATGTGATGGAGAAAGCAAGACAAGAGATCGACTCAGTCACAGGAAAGAGTAGAGTAGTAGAAGAATCTGATATTGTGAACCTTCCCTATCTGCAAGCGATAGTTAAAGAAACACTAAGGATTCACCCCACAGCGCCATTCATAGGGAGAGAATCAAGTGAAAGCTGCAATGTTTGTGGTTATGAGATTCCAGCAAAGACCCTATTGTTCGTTAATATGTGGTCAATCGGGAGGGACCCCAATCACTGGGAGAATCCACTTGAGTTCAGGCCAGAGAGATTTATTAATGAAAAGAGGCACTTGGACGTCAGGGGACAGCATTTTCAGCTAATTCCATTTGGGAGCGGAAGAAGAGGGTGTCCAGGAGCCTCACTTGCACTGCAGGTTGTACACACAAATCTTGCTGCCATGCTTCAGTGTTTTGAGTGGAAGGTTCATGGACGCAATCAAACTGTTCCCATGGAAGAGAAACCGGCGATGACCATTCCAAGGGCCCATCCCCTATTATGTGTCCCTGTGCCTCGCCTTAATCCTTTTTCTTCTATTATTGAAATGGAAAGTGATTGA 1677 0.4657 MGSGDRRTNREFAYLVRKTSSTSTILSQHHRPPGPQIFDIPPMAEFEGSILLILILALSTALVRVILTRNHSKARRPPTPPALPLIGHLHLLPPLPHQAFHKLSARYGSIVQLSLGSVPCVIASTPETAKEFLKTHETSFSHRFANGAVDYLTYGSKGFLFAPYGPYWKFMKKICMSQLLGGRTLDQLLPLRRTETIRFLRLLNEKGKAGEVVDVGDELLTLTNSIISRMIMSRTCSGNDKEARDIRKLVTDTAELTGKFNISDYIWFFKNLNLQGFDKRLKEIRDRFDTMMERTIKEHEEERRNRKELGEGGQIRDLLDILLDIHEDESSEIILSRDNIKAFVMDLFMAGTHTSAITTEWALAELINHPHVMEKARQEIDSVTGKSRVVEESDIVNLPYLQAIVKETLRIHPTAPFIGRESSESCNVCGYEIPAKTLLFVNMWSIGRDPNHWENPLEFRPERFINEKRHLDVRGQHFQLIPFGSGRRGCPGASLALQVVHTNLAAMLQCFEWKVHGRNQTVPMEEKPAMTIPRAHPLLCVPVPRLNPFSSIIEMESD 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1307 558 PRINTS P450 superfamily signature 490 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS P450 superfamily signature 350 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 Gene3D Cytochrome P450 61 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 CDD CYP93 108 542 - -
Glsi11g1307 558 SUPERFAMILY Cytochrome P450 70 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 58 543 - -
Glsi11g1307 558 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 483 492 IPR017972 GO:0005506|GO:0016705
Glsi11g1307 558 Pfam Cytochrome P450 77 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 402 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 442 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 359 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 222 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 128 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 339 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1307 558 FunFam Cytochrome P450 family protein 68 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1307 Glsi-ChrGlsi11 8201837 8207371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1307 43 545 Cytochrome P450 AT5G06900 48.317 2.89e-173 498