Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1306 ATGACTGATTTCCGAGGGTATATCCAACTTTTCATCATTTGGTTAGTCTCCGCCATCCTGGTTCGAGCCATACTAAGGAGAAAACAGAGCAAGGCTCGTCGTCCCCCGAGCCCGTTAGCCCTTCCTATCATCGGACACCTCCACCTTCTTTCTCCAATACCTCACCAAGATTTTCACAAGCTCTCAATCCGCTATGGACCCATAATACACCTTTTCCTTGGCTCTGTTCCTTGTGTGGTAGCTTCCACTGCAGAAGCTGCCAAAGAATTCCTCAAAACTCACGAAATGTCTTTCTCCAACCGCCCTGCTCAAACAGTTGCCGTTGAGCACTTGACTTATGGCTTCCAAGACTTCTTATTTGCGCCTTATGGACCCTATTGGAAGTTCATGAAGAAGCTTTGCGTCTCTGAGCTTCTCAGTGGCCGCATACTCGATCAACTTCTTCCGGTTAGACAGCAAGAGACGATGAGATTTCTCACAACTCTGCTCGAGAAAGGGAAGGTTGGAGGTGAGGCCGTGGATGTTGGAGGGGAGCTCATGAAACTTTCGAATAATATTATATCTAGAATGACTATGAGGCAAACGAGTTCTGAAGATGACAATGAAGCTCAAGAGGTGAGGAAGTTAGTGATAGATACGGCCGAGCTCACTGGGAAGTTTAACATATCGGATTTCATTTGGTTCTGTAAGAAGTTGGATTTGCAGGGATTCAACAAGAGGTTAAAGGAAATTCGAGACCGGTTTGACTCCTTGTTGGAAAGAGTAATTAAAGAGCGCCAAAAGGAAAGGAGTCGAAGAAAGGAACTGGGTGGAAGAGATCAAATCAGGGATATACTTGACCTTCTATTAGACATTTATGAAGATGAGAACTCTGAGATGAAATTAACTAAGGAGAACATCAAGGCCTTCATCATGGACATATATGTGGCAGGGACGGACACATCAGCTATAACCATCGAATGGGCTATGGCAGAGTTAATCAACCACCCACATGTGATGAAGAAAGCAAGACAAGAGATTGACTTAGTGATTGGGAAGAGTAGAATAGTAGCAGAATCAGATATTGTCAACCTTCCTTACCTTCAAGCTGTAGTTAAAGAAACACTAAGGATTCACCCTACAGGTCCATTAATTTTTAGAGAATCATCTAAAAGCTCTGTAGTTTGTGGATATGATATTCCAGCAAAGACACGGTTATTTATTAATGTGTGGGCTATAGGTAGAGACCCCAATCACTGGGAGAAACCACTTGAGTTTAGGCCAGAGAGGTTTATTAGCAATGGGCAGAGTCAAATGGATGTTAGGGGACAGCATTATCACCTAATTCCATTTGGGAGTGGAAGAAGAGGATGTCCGGGAACCTCACTGGCTTTACAGGTTGTGCACACCAATCTAGCTGCTATGATTCAGTGCTTCGAATGGAAGTTAAATGGAGACAATGGGACGGTTGACATGCAAGAAAAACCCGGGATAACTCTTCCAAGGGCCCATCCCTTAATTTGTGTTCCCGTGCCTAGGCTTTATCCATTCCCTTCTATATGA 1542 0.4403 MTDFRGYIQLFIIWLVSAILVRAILRRKQSKARRPPSPLALPIIGHLHLLSPIPHQDFHKLSIRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEMSFSNRPAQTVAVEHLTYGFQDFLFAPYGPYWKFMKKLCVSELLSGRILDQLLPVRQQETMRFLTTLLEKGKVGGEAVDVGGELMKLSNNIISRMTMRQTSSEDDNEAQEVRKLVIDTAELTGKFNISDFIWFCKKLDLQGFNKRLKEIRDRFDSLLERVIKERQKERSRRKELGGRDQIRDILDLLLDIYEDENSEMKLTKENIKAFIMDIYVAGTDTSAITIEWAMAELINHPHVMKKARQEIDLVIGKSRIVAESDIVNLPYLQAVVKETLRIHPTGPLIFRESSKSSVVCGYDIPAKTRLFINVWAIGRDPNHWEKPLEFRPERFISNGQSQMDVRGQHYHLIPFGSGRRGCPGTSLALQVVHTNLAAMIQCFEWKLNGDNGTVDMQEKPGITLPRAHPLICVPVPRLYPFPSI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1306 513 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 500 - -
Glsi11g1306 513 FunFam Cytochrome P450 family protein 26 501 - -
Glsi11g1306 513 Coils Coil 234 261 - -
Glsi11g1306 513 CDD CYP93 66 503 - -
Glsi11g1306 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Glsi11g1306 513 Pfam Cytochrome P450 35 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1306 513 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1306 Glsi-ChrGlsi11 8199074 8200736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1306 1 506 Cytochrome P450 AT5G06900 51.772 0.0 541