Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1293 ATGATCCACCTGCGAAAGCTTAGATTAGCATTCGCTTTCCAACGGACTACTTCCGGTTTTGCTGAGAATCATCTTAGGTTATCAGAAAACCCACTTCGGCCAACTGCGTTTTTCCTCATTGCTCAAAACCCTAAATTTTACAGAACGAAAAGACCACTTCAATCTGCCCATTTTGAAGATCTTGAAGCGACTTTTACTGCTGTCTCTCGCACCACTCGGGAAGCCCGAAAACAAGCCCAAGCTGCATTAATGGAATATCTGCATTCCACTAGAAACTTTCAGTACTTGGATGCAGATAGTATGAGTAGAAACTCGCCTTATTTTCTTGATAAGCTTCTGAAGAAAGTTGAAAAGGAAGACGACATTAGGCGATCACTTTCTCGGTATCTGCGTTACCATCCTATCAATGAATTTGAACCCTTCTTCGAAAGCATAGGTTTGAAACCTTCCGAATATGTGTCTCTTCTTCCAAAAAATATGATTTATTTAAGTGATGATCAACTGTTGCTAGAGAATTATCACACCCTGTGTAACTATGGGATTCCACGTAATAAGATGGGAAAGATTTATAAGGAAGCAACTGAAGTATTTCGCTATGACTATGGAGTTTTACCGTCACAACTTCGAGCTTATGAAAAACTGGGTCTTGGCCAGTCTACTCTTCTAAAAATTATTGCTTCTAGCCCATACCTTTTGATTGGGGATGCTAACCTTGATTTTATCACGGTTATAGAGAAATTGAAGCATTATGTCAATGTGAATGATATTAATGTTGAGGGACATTTGTCGGATCGAACTTCTTATAATTGGGGCCAGATGCTTGAGCTCTTATGCTTGCTTGGCAAGGTTTTCAGTGAGCAACAGTTGGCTGACATAATGAGCCAGAACCCTAATCTTCTTTTTGAGGGGTCAGGAGGTAGGACACTCTCCCTGATAGGCTTCTTGTTCAAATTTGGATTGTCAATGAATGAGATCTCTCTCATATTTTTAAAATTTCCAGAAATTCAAGTTGGCAAATTCCTTTCAAATTTAAGGCACTGCTTTCTGTTCCTAAGTGAAATTGAATTGGAGGCTGCAGAGATTGGGAAGGTTTTCCGCTCTCACTCCTTATTATTGGGTTCATTCACTTTGAAGAAAACAAATAGTTTACTTGCTAACTTGAATGCTGGCAAGAAGCGAATTCGTATCCTTATACAGGATAATCCACTGGAATTGAAGAATTGGGCTCTGGGAAAAAGAGTTCAGCCTTTGCCAAACTCAGAGGAAGAACAAAAGTCCCAGTTGCGGAAGACAGAGTTCTTGTTGAGCCTGGGATATGTAAAGGACTCGATACAAATGAAAGAAGCGTTTAAGGTTTTCAGAGGCAAGGGAGCAGAACTGCAAGAGAGGTTCGATTGTATTGTTAAAGCTGGCTTGGATTGTCGGGATGTCCAGGAAATGATAAAAGTTTCCCCTCAGATTCTTAACCTGACTATAGATGCGATCAACATGAAAATTAACTATCTTGTAAATGAACTAGGATATCCGATATCATCTTTAGTGAGCTTCCCATCTTTTCTTTCCTATAAACCTGAAAGAGTCAAGCTGAGGTTGTCAATGTATAATTGGCTTATAGACCAGGGAACTGCAGATCCGAAGCTTGCTTTGAGCACTATAGTTTCATGCTCAGATAAAGTATTCCTACAGCAGTATGTAAATCATCATCCAAGTGGCCCTCAAGCTTGGCAGGATTTGAAGAATAAAATTTATTCTGAGAATTAA 1761 0.3958 MIHLRKLRLAFAFQRTTSGFAENHLRLSENPLRPTAFFLIAQNPKFYRTKRPLQSAHFEDLEATFTAVSRTTREARKQAQAALMEYLHSTRNFQYLDADSMSRNSPYFLDKLLKKVEKEDDIRRSLSRYLRYHPINEFEPFFESIGLKPSEYVSLLPKNMIYLSDDQLLLENYHTLCNYGIPRNKMGKIYKEATEVFRYDYGVLPSQLRAYEKLGLGQSTLLKIIASSPYLLIGDANLDFITVIEKLKHYVNVNDINVEGHLSDRTSYNWGQMLELLCLLGKVFSEQQLADIMSQNPNLLFEGSGGRTLSLIGFLFKFGLSMNEISLIFLKFPEIQVGKFLSNLRHCFLFLSEIELEAAEIGKVFRSHSLLLGSFTLKKTNSLLANLNAGKKRIRILIQDNPLELKNWALGKRVQPLPNSEEEQKSQLRKTEFLLSLGYVKDSIQMKEAFKVFRGKGAELQERFDCIVKAGLDCRDVQEMIKVSPQILNLTIDAINMKINYLVNELGYPISSLVSFPSFLSYKPERVKLRLSMYNWLIDQGTADPKLALSTIVSCSDKVFLQQYVNHHPSGPQAWQDLKNKIYSEN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1293 586 PANTHER CGI-12 PROTEIN-RELATED 78 300 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 SMART mt_12 326 357 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 SMART mt_12 478 509 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 SMART mt_12 222 254 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 SMART mt_12 187 217 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 SMART mt_12 510 541 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 FunFam Transcription termination factor MTEF18, mitochondrial 311 578 - -
Glsi11g1293 586 FunFam mTERF family protein 115 267 - -
Glsi11g1293 586 Pfam mTERF 429 561 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 Pfam mTERF 284 415 IPR003690 GO:0003690|GO:0006355
Glsi11g1293 586 Gene3D Transcription termination factor 3, mitochondrial 307 577 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1293 Glsi-ChrGlsi11 8119177 8120937 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi11g1293 mTERF 8.4e-16 No_clan