Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1292 ATGTACAGCAATCCATGGGAATCGCTCATAGGAAGTTGCAGTCCAGCCAACGTGAGAGGAGTAGAACAGCCATGTTTTGAGTCCATTGAATCACCCTTCAACATCGTTGCTCCTCTTCAAACATCAGCTGACTTCCGCGCAACCAAAAGCTGGATGAGCTTTCACCACCACGACCCTCAGATTGACATTCCTACTTCTTGTTTTGAGCTTCCAAACACAATAGATTCACCATTTCCATTTAGTCAATCTACTGAGGATAACTTCACCGTTAACACTAATCAAGATCCACCAACCTCCCAATTCACTAGCTCCTTGCTGTCACTTGTTGAATCTTTCTTGTGTGACAGTGAAGATAATTTTTCTTCTTTAGAGAAATATAGTGAATTCCCTTCTAATTATTCAGAAAAATGTAGTGATTTTCCCGGTGACAAGGTACCATTGTATCAGCACTTTCCACAAGAAAACAAGTCGCTGGCTAGTTATGATGCTGCCGCAGAAGAGAAGACCATTCAGAGAAATAAGCCAGAGAAGCAGTTTTCGCGATCACGACCTTGGCTCCCTCCTTCTGCTAGCAACTCTGTTCCTTGGACACCTGCTCCAACACGTAAAAGAAGAATAAGATGGACCAAAGATCTTCATGAGCAATTTATTAGCATTGTTAATCGCCTTGGTGGTCCTGAAAAGGCAAAGCCTAGGACTATACTAAAGATGATGAATTCGGATGGGCTGACTGCTTCTCAAGTTAAAAGCCATTTGCAGTTACCTCTTGGTATTTCAGACAGACCTGGGAAAGGAAATAGATCAGATGGGGTCGCTGAGCTTCGATTCGAAATCCCTGAGGAACTTGAGGGAACAGTAAGGCAACTGCAACTTGAGGTCCAAAGGAGTCTTGATGAACAACGAGAGAGTAAGAATGTCTATTCTGCTAGAAGGGTCATTGATCCATTGGTATCTATGGTAGTTGTTCAATGTGGGAGGAATATTGTTGTAAAATACGCTGATTCCCACAAAGGTAAAACATGCCAACCACCATTTCCTGCTGGAGTGGTTCCAATGGCAGCCTTACCAATGGCTTCTGGACATGTACAGTCCGGAAAGGCACATATAAGTGCCGCTACTGTTGGCTACACTTACCCCCCTAACGGTGGCATCGTACCCTGCATCTTCCTTTCCAAAGCCCTCCCACTGCACCTACTCCTTATCCAACCAAAGGACAAGTTTATTGTCCTCCAGCTTCTGCGAAGGTGA 1248 0.4431 MYSNPWESLIGSCSPANVRGVEQPCFESIESPFNIVAPLQTSADFRATKSWMSFHHHDPQIDIPTSCFELPNTIDSPFPFSQSTEDNFTVNTNQDPPTSQFTSSLLSLVESFLCDSEDNFSSLEKYSEFPSNYSEKCSDFPGDKVPLYQHFPQENKSLASYDAAAEEKTIQRNKPEKQFSRSRPWLPPSASNSVPWTPAPTRKRRIRWTKDLHEQFISIVNRLGGPEKAKPRTILKMMNSDGLTASQVKSHLQLPLGISDRPGKGNRSDGVAELRFEIPEELEGTVRQLQLEVQRSLDEQRESKNVYSARRVIDPLVSMVVVQCGRNIVVKYADSHKGKTCQPPFPAGVVPMAALPMASGHVQSGKAHISAATVGYTYPPNGGIVPCIFLSKALPLHLLLIQPKDKFIVLQLLRR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1292 415 MobiDBLite consensus disorder prediction 184 198 - -
Glsi11g1292 415 MobiDBLite consensus disorder prediction 162 199 - -
Glsi11g1292 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 253 IPR006447 GO:0003677
Glsi11g1292 415 Gene3D - 202 255 - -
Glsi11g1292 415 Pfam Myb-like DNA-binding domain 207 253 IPR001005 -
Glsi11g1292 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 201 303 IPR046955 GO:0003700
Glsi11g1292 415 SUPERFAMILY Homeodomain-like 201 253 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1292 Glsi-ChrGlsi11 8113283 8117793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1292 198 253 G2-like Transcription Factor Family AT5G06800 64.286 1.46e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi11g1292 Myb_DNA-binding 4.7e-07 CL0123