Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1277 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGACCGGTCAGGCGGTATGCCCGCATGAGCAAGGATGATGTTGATGATTCTTCCCCAATTGAAGACGCTCTGCTCTGGTACAAGGACCTCGAGAAGCACTCCTGCGGCGAATTCTCTTTTGCTGTGGTCCAAGCCAATGAAGTTATCGAGGATCACAGCCAGGTCGAGACGGGCTCTGACGCCGTGTTCATCGGAGTCTACGATGGCCACGGCGGTCCTGAAGCGTCCCGGTTCATCAGCGACCACCTCTTCCATCATTTAATGAGGATTGCTCGAGACAACGGTACTATATCTGAAGATATCCTCAGGGGTGCTGTTTCTGCTACTGAGGATGGGTTTCTGACTTTTGTTCGAAGGACTTATGGTATAAAGCCATTGATGGCAGCAATTGGTTCCTGTTGTCTGGTTGGTGTTATTTGGAAAGGGACATTATATGTCGCCAACCTAGGAGACTCTCGTGCTATAATTGGTTCTATAGATGGATCCAACAAGATTGTTGCCGAGCAGTTGACCAGAGAGCATAATGCTAGCAAAGAGGAGGTTAGACGGGAACTCAGGTCTTTGCATCCAGAAGATTCTCAAATTGTAGTTATGAAGCATGGAACATGGCGCATTAAAGGCATCATCCAGGTATCCAGATCTATAGGTGATGCATATTTGAAGAGACCAGAGTTCTCTCTTGATCCTACATTCCCTCGGTTCCACCTACCTGAACCTATCCGTCGTCCTGTGCTATCAGCAGAGCCATCTGTGTGTACAAGGGTCTTACAACCCAATGATAAATTTCTTATATTTGCATCTGATGGGCTTTGGGAACACATAACAAATCAGGAAGCTGCTGAGATTGTGTATAACAACCCGCGGACTGGGATAGCAAGAAGACTGCTTAAAGCAGCTCTGAATGAGGCAGCTAGGAAACGAGAAATGAGATATAAAGACCTTCAGCAGGTTGAGAAGGGGATCAGGCGGTTTTTTCACGATGATATCACGGTTGTTGTTGTCTTCATAGACCAAGAATTGGTTGGGAAGAAGATTACTGTTCCAGAGTTGTCCATCAGAGGGTTCATTGACACGGTCGGTCCATCAAATTTTAAACTTGTCCGGGAATTGACTTGA 1155 0.4658 MFSWLARIVSACLRPVRRYARMSKDDVDDSSPIEDALLWYKDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDAVFIGVYDGHGGPEASRFISDHLFHHLMRIARDNGTISEDILRGAVSATEDGFLTFVRRTYGIKPLMAAIGSCCLVGVIWKGTLYVANLGDSRAIIGSIDGSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPTFPRFHLPEPIRRPVLSAEPSVCTRVLQPNDKFLIFASDGLWEHITNQEAAEIVYNNPRTGIARRLLKAALNEAARKREMRYKDLQQVEKGIRRFFHDDITVVVVFIDQELVGKKITVPELSIRGFIDTVGPSNFKLVRELT 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1277 384 FunFam Probable protein phosphatase 2C 42 41 357 - -
Glsi11g1277 384 Coils Coil 180 200 - -
Glsi11g1277 384 Pfam Protein phosphatase 2C 64 318 IPR001932 -
Glsi11g1277 384 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Glsi11g1277 384 SMART PP2C_4 44 347 IPR001932 -
Glsi11g1277 384 Gene3D - 21 358 IPR036457 -
Glsi11g1277 384 SUPERFAMILY PP2C-like 55 350 IPR036457 -
Glsi11g1277 384 CDD PP2Cc 51 349 IPR001932 -
Glsi11g1277 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Glsi11g1277 384 PANTHER PROTEIN PHOSPHATASE 36 347 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1277 Glsi-ChrGlsi11 8027339 8030457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1277 1 379 PP2C-type Phosphatase Gene Family AT5G06750 70.769 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2421 02 74334627 74337808 Glsi11g1277 11 8027339 8030457 CCT
Glsi11g1277 11 8027339 8030457 Glsi11g1277 11 8027339 8030457 ECH