Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1274 ATGGAGACGAGAGATTCGAATGGGGATCGGAACTCACGCAATGGGAATTTTGGATTTGAAGTCAACGATCGGAGATTCGCGTTTTCGCGCCAACTCTCATTCCAGCAATCCCAAGAACCTCACACACCGATTTCAATTGGTTCGAATGATTCCACAAGGCCTTTACTTTCCCGCAGCGACTCCAGCATACACATTCCTCGGGGGCATTATTGGTCTCCGCAAGATGACAATTTTTCTGGCGAAAGGAAAGCATTGGCAGAGAAAGTCTCTTTTTCTTCCTTTATTTTCTCGGTTTTTGGAAATATTAGGTCTGGGCATAGATATATGAAGAGGTTATTTTTTATGATTTCACTGAATGTAGCATACTCGACCGCGGAGTTATTGATTGGTCTCTTTACGGGGCGCGTAGGTTTGGTCTCTGACGCATTTCACTTAACTTTTGGATGTGGTGTTCTGACTTTTTCATTATTTGTTATGGCTGCCTCAAGGAAGAAGGCTGATAGAGATTATACTTATGGGTATAAAAGGCTAGAAGTTATGTCTGCATTTACAAATGCTCTATTTCTTTTGTTTATGTCATTCTCCCTAGCAGTTGAAGCACTTCATGCTTTCATACAAGACGAATCGGAGCACAAGCATTACTTAATTGTTTCAGCAGTGACAAACTTAATTGTGAATCTCATTGGTGTGTGGTTCTTTAGGAACTATGCGCGGATTAATCTTGCTTATAGAAATGCAGAAGATATGAATTACCACTCAGTTTTCCTGCATGTTCTTGCAGACTCTATTCGCAGTGCAGGTTTGATATTGGCTTCCTGGTTGTTGTCCATCAGGGTTCAGAATGCAGAAGTCTTGTGTTTGGGTCTTGTTTCAGTTGCAGTTTTTATGCTTGTCCTGCCACTCTTTAGGGCAGCTGGTGGTATCTTGCTCCAAAAAGCACCTCCAAGTATTCCAACTTCTGCTTTGACCAAATGCTTGAGACAGATTACTGCTCAGGAAGAGGTGCTGGAAGTTACACAAGCTCGTTTTTGGGAATTAGTGCCTGGTCATGTGGTTGGTTCAATCTCCATACAGGTGAAAAAGGGGATGGACGATCGCCCAATACTTGGATTGGTGCATGGTCTATACCATGATTTGGGTGTGCAGGACCTCACGGTGCAGACCAATTATTAA 1173 0.4271 METRDSNGDRNSRNGNFGFEVNDRRFAFSRQLSFQQSQEPHTPISIGSNDSTRPLLSRSDSSIHIPRGHYWSPQDDNFSGERKALAEKVSFSSFIFSVFGNIRSGHRYMKRLFFMISLNVAYSTAELLIGLFTGRVGLVSDAFHLTFGCGVLTFSLFVMAASRKKADRDYTYGYKRLEVMSAFTNALFLLFMSFSLAVEALHAFIQDESEHKHYLIVSAVTNLIVNLIGVWFFRNYARINLAYRNAEDMNYHSVFLHVLADSIRSAGLILASWLLSIRVQNAEVLCLGLVSVAVFMLVLPLFRAAGGILLQKAPPSIPTSALTKCLRQITAQEEVLEVTQARFWELVPGHVVGSISIQVKKGMDDRPILGLVHGLYHDLGVQDLTVQTNY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1274 390 MobiDBLite consensus disorder prediction 36 59 - -
Glsi11g1274 390 Pfam Cation efflux family 112 310 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi11g1274 390 PANTHER - 87 389 IPR045316 GO:0005385|GO:0006829|GO:0006882
Glsi11g1274 390 MobiDBLite consensus disorder prediction 36 60 - -
Glsi11g1274 390 FunFam Metal tolerance protein C2 108 309 - -
Glsi11g1274 390 Gene3D Cation efflux protein transmembrane domain 108 309 IPR027469 -
Glsi11g1274 390 NCBIfam cation diffusion facilitator family transporter 109 365 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi11g1274 390 SUPERFAMILY Cation efflux protein transmembrane domain-like 106 311 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1274 Glsi-ChrGlsi11 8010156 8015011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1274 109 387 Inorganic Solute Cotransporters AT3G61940 20.656 1.36e-17 81.3