Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1269 ATGCTTTCTTCTACTTGTTATTCTTTACTGGCTACCATTTTGGTAGTTCTAACCTTGCATCCCTCGTCAAATGCTCAACTGAGCTCAACCTTCTATTCTAACACATGCCCAAATGTTTCTTCCATAGTGAGAAGTGTCGTTCAGCAGGCTCTGCAATCAGATTCCCGTATAGGCGCAAGCCTCATTCGTCTCCATTTTCATGACTGCTTTGTCAATGGATGCGATGCCTCCATTTTGTTGGACCAGGGTGGCAACATAACACAGAGCGAGAAAACTGCGGCTCCCAACAACAATTCCATTCGGGGCTTTGATGTAGTTGACAACATCAAGACCTCCCTCGAAAGTTCATGCCATGGTGTCGTATCTTGTGCTGATATTCTTGCCCTTGCGGCTGAAGCTTCTGTGTCTCTGTCAGGAGGTCCTTCATGGAGCGTTCAACTTGGTAGAAGGGACAGTCTAACTGCGAACCAGGGTGGTGCCAATACCTCTATTCCCAGTCCATTTGAAGGGCTAGCCAACATCACAGCCAAGTTCTCTGCTGTTGGGTTAGACACAAACGATCTGGTCGCATTATCTGGTGCACACACTTTTGGTCGTGCCCAATGCCGATCTTTCAGCAACCGGCTGTTCAATTTCAGTAGTGGCAGCCCTGATCCGACTCTGAACTCCACCTATCTGGCGACTCTGCAGCGAAATTGTCCACAAAATGGAAACGGATCTACTCTGAACGACCTTGACCCTTCATCGCCCGACACTTTCGATAACAACTACTTCACTAATCTTGTCAGCCACCGGGGACTCCTCCAATCAGACCAGGAGCTGTTTTCCACCAATGGGTCTTCTACAGTCTCTATTGTTAACAATTTTGCCAACAACCAATCCGCTTTCTTCGCAGCCTTTGTTCAGTCAATTATAAATATGGGTAATATTAGCCCATTAACGGGAACTCAGGGACAGATCAGATCCGACTGCAAGAAAGTCAATGGCAGTTGA 993 0.4713 MLSSTCYSLLATILVVLTLHPSSNAQLSSTFYSNTCPNVSSIVRSVVQQALQSDSRIGASLIRLHFHDCFVNGCDASILLDQGGNITQSEKTAAPNNNSIRGFDVVDNIKTSLESSCHGVVSCADILALAAEASVSLSGGPSWSVQLGRRDSLTANQGGANTSIPSPFEGLANITAKFSAVGLDTNDLVALSGAHTFGRAQCRSFSNRLFNFSSGSPDPTLNSTYLATLQRNCPQNGNGSTLNDLDPSSPDTFDNNYFTNLVSHRGLLQSDQELFSTNGSSTVSIVNNFANNQSAFFAAFVQSIINMGNISPLTGTQGQIRSDCKKVNGS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1269 330 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Glsi11g1269 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Glsi11g1269 330 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Glsi11g1269 330 Pfam Peroxidase 43 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 Gene3D Peroxidase, domain 2 165 307 - -
Glsi11g1269 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 FunFam Peroxidase 165 307 - -
Glsi11g1269 330 Gene3D - 31 328 - -
Glsi11g1269 330 PANTHER PEROXIDASE 72-RELATED 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1269 330 FunFam Peroxidase 30 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1269 Glsi-ChrGlsi11 7983936 7985190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1269 9 330 Peroxidase AT5G06720 73.375 1.32e-171 478