Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1253 ATGGACAAGGCAGGCGGTGAGATCAGAGAGACCCTTGACTTCATGAATGTTGAATCCTTCTCTCAGCTACCCTTCATCCGCCCTGCACCTGTTAAAGAAAAGGGCATTAGACTTTTCGGCATAGAATTCGGCGGCGGCGGCGGCGACGCACCCACCACCGCAACCGACGAGTCCGAGTCAGCGGAAACAACTACTAATGCTTTTGAGGTTGATGCCAAGGACAACACAAACACCGACAACTGCGAGAGTATCCGAAGATTTGAATGCCATTACTGCTGCAGAAACTTTCCAACTTCCCAAGCCTTAGGTGGCCACCAGAACGCCCATAAACGAGAGAGGCAACACGCCAAACGAGCACACCTTCAGTCAGCTATGGTGCACAGTAGCCTCTCTAACGCCCATGTCTACGGCCTCATGAACTACAGGTTCGGGTCTGCAGCTTCCGCCCCAACGACGCCAATGCCTTATCCAACATGGAAGACTAACGCTACCACTGCTATTGCTAGCACCGGTACGGGAAGGTTTTACGGAAGCACATATTCCCCTCAGCAACCCATCAATGGCAGCCCCTTGACCTTCTGGCGAATCCCTCCCGTCCAAAGTAACCCTACTTTCAACCGTGACCATTCGTTGCATCCATCATTGCCCTTGTTTGCTGGTGATGAGACGAACATGACGGCCTCACAGCTTGGTGGGTCTGCTTCACAAAACCGGTACGTCTATGATTCCAAACCAAGCGTCAAAGACCATGTGAGTTTGGATCTTCATCTGTGA 774 0.5194 MDKAGGEIRETLDFMNVESFSQLPFIRPAPVKEKGIRLFGIEFGGGGGDAPTTATDESESAETTTNAFEVDAKDNTNTDNCESIRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSSLSNAHVYGLMNYRFGSAASAPTTPMPYPTWKTNATTAIASTGTGRFYGSTYSPQQPINGSPLTFWRIPPVQSNPTFNRDHSLHPSLPLFAGDETNMTASQLGGSASQNRYVYDSKPSVKDHVSLDLHL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1253 257 SUPERFAMILY beta-beta-alpha zinc fingers 85 115 IPR036236 -
Glsi11g1253 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Glsi11g1253 257 PANTHER ZINC FINGER PROTEIN GIS 1 257 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Glsi11g1253 257 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1253 Glsi-ChrGlsi11 7885902 7886675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1253 1 257 C2H2 Transcription Factor Family AT3G58070 44.086 6.00e-50 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2451 02 74535927 74537391 Glsi11g1253 11 7885902 7886675 CCT
Glsi11g1253 11 7885902 7886675 Glsi11g1253 11 7885902 7886675 ECH