Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1232 ATGGGCCGATCCAGACACATTTATGATTTTGGTGCTGGCCCGTTTTATAAATACCAAAACCTACGATTTTTTGCCCATGTGTTGTCGTTGGCCTGCGAGAGCCTAGGCTTAGCCGTCTTCTCTCTGTGTCTCAGTTGCTCTCTAAGCACAGCTATGGCTGCTGCGGTGGCGGTTCCTGAAGAGGCTGTGAAGAATATAGATCTGACCCAGATCGAGGTGAAGCTCTTTAATAGGTGGACCTTCGACGACGTTCAGGTTAATGACATTTCTCTTGCTGATTATATTGGAGTGGCGCCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCCCAGTGTCCCATAGTTGAGAGACTTACCAACTCTCTCATGATGCATGGTAGAAACAATGGGAAGAAACTCATGGCCGTGAGAATTATCAAACATGCCATGGAAATTATTCACTTGCTAACTGACCAGAACCCCATTCAAGTTATTATTGATGCTGTAATTAACAGTGGTCCTCGTGAAGATGCAACACGGATTGGGTCTGCTGGTGTGGTTAGGAGACAGGCTGTGGATATCTCGCCCCTTCGCCGTGTTAATCAGGCCATCTATCTTCTAACAACTGGTGCACGTGAAGCTGCTTTCAGAAATTCGAAGACAATTGCTGAAAGCTTGGCTGATGAACTTATTAATGCTGCAAAGGGATCATCTAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCAAATCGTTAA 786 0.4529 MGRSRHIYDFGAGPFYKYQNLRFFAHVLSLACESLGLAVFSLCLSCSLSTAMAAAVAVPEEAVKNIDLTQIEVKLFNRWTFDDVQVNDISLADYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIIDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNSKTIAESLADELINAAKGSSNSYAIKKKDEIERVAKANR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1232 261 SUPERFAMILY Ribosomal protein S7 74 261 IPR036823 -
Glsi11g1232 261 CDD uS7_Eukaryote 74 261 IPR005716 GO:0003735|GO:0006412|GO:0015935
Glsi11g1232 261 Pfam Ribosomal protein S7p/S5e 115 261 IPR023798 -
Glsi11g1232 261 Gene3D Ribosomal protein S7 domain 54 261 IPR036823 -
Glsi11g1232 261 NCBIfam 30S ribosomal protein S7 72 261 IPR005716 GO:0003735|GO:0006412|GO:0015935
Glsi11g1232 261 ProSitePatterns Ribosomal protein S7 signature. 127 153 IPR020606 GO:0003723|GO:0003735|GO:0006412
Glsi11g1232 261 PANTHER RIBOSOMAL PROTEIN S7 54 261 IPR000235 GO:0006412
Glsi11g1232 261 FunFam 40S ribosomal protein S5 56 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1232 Glsi-ChrGlsi11 7714146 7721143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1232 72 261 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.632 1.26e-131 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g1232 11 7714146 7721143 Glsi11g1232 11 7714146 7721143 ECH