Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1227 ATGCCTCAACTCACCTCACTCAAAACTATGGGTTCCCTTCCCCACATAGTAGAGGACTGCATGGGTTTCCTCCGACTCTACAGTGATGGCTCCATTTTCCGCTCCAATATTGACTCACAATTCAAAGTTTCGCCCATTCAAGACCACTCCGTACTCTTCAAAGACTGCCTCTTTCACAAAAGATTCAACCTTCATCTTCGTCTCTTCAAACCTCAATCCTCTTCCACCAAACTACCTCTGCTAATCTTCATTCATGGCGGAGGATTCTGTTTCGGCTCACGCGCCTGGCCCCATATTCATAATTTCTGCGTCCGTCTCGCTTCCGCCCTCCCAGCGCTTGTGCTCGCTCCCGACTACCGCCTTGCACCGGAACACCGCCTTCCCGCCGCGATGGACGATGCAGTGGAGACCGTGAGGTGGGTACAGAGGCAGGCTTTGAGTAAGGCGCACGGTGGGGATGCATGGTTGAATTGTGCTGTTGACTTTGACCGGGTGTTCATAATGGGGGACTCCTCAGGCGGGAACATTGCGCACCACTTGGCGGTTCGGTTGGGATCCGGATCCAGGGATATGGATCCGATTCGCGTACGAGGTTACGTGCTGTTGGCGCCGTTTTTCGGCGGAGAGGTTAGAACCAAGTCAGAGGAGGGTCCCGGCGAAGAAATGTTGAGCTTGGAGTTACTAGACAGATTTTGGAGGCTGTCAATGCCTGTTGGAGAGACAAGAGACCACCCCTTGGCAAACCCATTCGGACCTGGTAGCCCAAACCTTGCACGAGTGAAGCTTGACCCCATTTTGGTGATAGTAGGTGGCAACGAATTGCTGAAGGATAGAGCTGAGGAGTACGCAAGAAGGTTAAAAGAATTAGGGAAGGTTATTGAATACGTTGAGTTTGAGGGAAGAGAGCATGGATTTTTCATGAATGATCCTTACTCACAAGTTGCACAAGACCTCATGCAAATCCTTAAACGATTCGTCCTTGAACATTCTAGTTAG 996 0.508 MPQLTSLKTMGSLPHIVEDCMGFLRLYSDGSIFRSNIDSQFKVSPIQDHSVLFKDCLFHKRFNLHLRLFKPQSSSTKLPLLIFIHGGGFCFGSRAWPHIHNFCVRLASALPALVLAPDYRLAPEHRLPAAMDDAVETVRWVQRQALSKAHGGDAWLNCAVDFDRVFIMGDSSGGNIAHHLAVRLGSGSRDMDPIRVRGYVLLAPFFGGEVRTKSEEGPGEEMLSLELLDRFWRLSMPVGETRDHPLANPFGPGSPNLARVKLDPILVIVGGNELLKDRAEEYARRLKELGKVIEYVEFEGREHGFFMNDPYSQVAQDLMQILKRFVLEHSS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1227 331 PANTHER ARYLACETAMIDE DEACETYLASE 20 307 - -
Glsi11g1227 331 Coils Coil 272 292 - -
Glsi11g1227 331 Gene3D alpha/beta hydrolase 24 330 IPR029058 -
Glsi11g1227 331 SUPERFAMILY alpha/beta-Hydrolases 11 326 IPR029058 -
Glsi11g1227 331 Pfam alpha/beta hydrolase fold 81 307 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1227 Glsi-ChrGlsi11 7678826 7681270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1227 16 326 Carbohydrate Esterase AT5G16080 35.202 6.47e-59 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3258 02 80647289 80650890 Glsi11g1227 11 7678826 7681270 CCT
Glsi11g1227 11 7678826 7681270 Glsi11g1227 11 7678826 7681270 ECH