Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1167 ATGTCTAACTGCAGAAAAAAGCTTCTTCTAAACACCGTGTCCGTCAAACTAGGCTGCAGCAGCTGCAGGAGACCAAGGCTTTCTGACATTTTCCACCCAAAGCCAAAACCCAACAAGCCCTCTTCCCAAAAACACAAACCATACAACCATTCTTCTTCTACCCCCTGGGACAGATACGACACTGCCACCAGCACTACCAACACCACCACCGCCACATTCTCTCCCTACCTCGACTCCTCACAGTTTTCTGACTCCGAGAATTTCGTGAATGCCTCGAAGACCGTCGTAGGTTTCGGCAGAGTAGGCGGGGAAGGCGTGGCAGTGGAGAAAGATTCCGACGACCCTTATTTGGATTTTAGGCATTCCATGCTCCAAATGATATTGGAGAACGAAATATACTCCAAGCATGATCTCCGGGAGCTTCTGAATTGTTTTCTTCAGCTCAATTCACCGTATCACCATGGAGTTATAGTCAGAGCCTTCACTGAGATCTGGAATGGGGTCTTTTCCGCGAGGTCCAACACCCCCAGATTTCACTTGAGTCGCTAAGGGCTGGAAAAAAGAGTTTCACAAAAGGAATTTGGTCTTGTCCTGACAACAAAAGCAAACCAGCTGCTAATGTACAAAGGGACACATGAGTTTGGAGCTCGCAACCTACTCCTACACTCAAAGCCAGATTTGACTCTTTTAAGAATTAACATTTTATCAGGCTCAGACAAAGGCTATGGATTCTTTGTCTGTGTTCCATGTGAAGAAGAGGCACCTATTAGATTCTCTCAACGGTGGATTACAAATACATACAAGACCCATATAGAGACAATGTTTTCCAACACGAAGTCTATATTCTCAGTTTCTTTGGCTGAGACCATGATAATCCTGCTCTCTGCAGTTGCCCAGGATTTGAGTCTAGCAGGACCACGCCCAAATTCTGCGCCGGATTTGTACCCATCATTTCATAATGACTGGGCAAATTCAAAATCAACGGCTGTGATCTCACTCTTCCATTTGCAAAGTATCTAA 1020 0.4549 MSNCRKKLLLNTVSVKLGCSSCRRPRLSDIFHPKPKPNKPSSQKHKPYNHSSSTPWDRYDTATSTTNTTTATFSPYLDSSQFSDSENFVNASKTVVGFGRVGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKHDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSARSNTPRFHLSRXGLEKRVSQKEFGLVLTTKANQLLMYKGTHEFGARNLLLHSKPDLTLLRINILSGSDKGYGFFVCVPCEEEAPIRFSQRWITNTYKTHIETMFSNTKSIFSVSLAETMIILLSAVAQDLSLAGPRPNSAPDLYPSFHNDWANSKSTAVISLFHLQSI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1167 339 NCBIfam uncharacterized plant-specific domain TIGR01568 106 166 IPR006458 -
Glsi11g1167 339 ProSiteProfiles OVATE domain profile. 108 167 IPR006458 -
Glsi11g1167 339 Pfam Transcriptional repressor, ovate 112 168 IPR006458 -
Glsi11g1167 339 MobiDBLite consensus disorder prediction 28 61 - -
Glsi11g1167 339 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 171 IPR038933 GO:0045892
Glsi11g1167 339 MobiDBLite consensus disorder prediction 44 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1167 Glsi-ChrGlsi11 7299644 7306483 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi11g1167 Ovate 3.8e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g1167 11 7299644 7306483 Glsi11g1167 11 7299644 7306483 ECH