Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1166 ATGAAGCTTCCCTCTCTTCTCAAGAATACGGAAATAAGGCCATCATCTTCTTCCTGGGCATGGCCATCTTGTCACCAACCCAGAACCCTCTCTTTTAGAGCCAACAACGACATATTCAAAACCGTCAACTCAGGCTACCTAGACGCCTCGGTGGAAAGCCCTGAATCCTTTTTCACCAACTCTTCCCATTCTGCTAGCTTCTCCACGGCGTCAGAGGAGTCCAGAGCAGGGGATCCAATCGAGACTGTGATTCGTGGGTTGCGCTCAGACCGTCTCTTCTTCGAGCCAGATGAGACCAGCTCCATATTAGACGCAAAAGCAGCAACCTTAACATTCAAAGACAGCGTCGCACTATCCTTGGAATCCCAAGACCCTTACGTAGATTTTCGCAAGTCCATGGAGGAGATGGTGGAGGCTCACGGTTTGAAGGACTGGGAGAGTCTCGAGGAGCTTTTGTGCTCCTATTTGAGGGTCAACGGGAAAAGCAATCATGGGTATATCGTGGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTAATGCTTCTTGTTCATCTTCTTCTTCTTCTTCTTCTCATTCTCCCCCTTCTCCTCTATCGTTTTATAGTTCTTCTCTTTCTTCATCTTTTAGCACTCCCTGTGTTTCGTGTTTGGAAGCTGAGGAAGAGTTTGATACTCCTAGTTCATCGCTATTGTTAGAACAAGTTAAGGAGGAGATTAGACACGAAGATGAAGCTTCGTCTTCAAATGCTTGA 756 0.463 MKLPSLLKNTEIRPSSSSWAWPSCHQPRTLSFRANNDIFKTVNSGYLDASVESPESFFTNSSHSASFSTASEESRAGDPIETVIRGLRSDRLFFEPDETSSILDAKAATLTFKDSVALSLESQDPYVDFRKSMEEMVEAHGLKDWESLEELLCSYLRVNGKSNHGYIVGAFVDLLVGLAFNASCSSSSSSSSHSPPSPLSFYSSSLSSSFSTPCVSCLEAEEEFDTPSSSLLLEQVKEEIRHEDEASSSNA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1166 251 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 62 179 IPR038933 GO:0045892
Glsi11g1166 251 Pfam Transcriptional repressor, ovate 122 178 IPR006458 -
Glsi11g1166 251 ProSiteProfiles OVATE domain profile. 118 177 IPR006458 -
Glsi11g1166 251 NCBIfam uncharacterized plant-specific domain TIGR01568 116 179 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1166 Glsi-ChrGlsi11 7298337 7299092 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi11g1166 Ovate 2.9e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2557 02 75326682 75329133 Glsi11g1166 11 7298337 7299092 CCT
Glsi11g1166 11 7298337 7299092 Glsi12g0582 12 21196095 21196802 ECH
Glsi11g1166 11 7298337 7299092 Glsi11g1166 11 7298337 7299092 ECH