Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1114 ATGACCCTTAGAAAGACAAACGTTTCAGTGGGTTTCAGTGGCTCTGTTAAGCTTCCTCATATTCCTCGTCCTAAGATGAAGATTTGCATGCTTGGTGATGCTCAGCATGGGGAAGAGGCAGAAAAAATAGGACTGGATTACATGGATGTGAAAGGGCTGAAAAAACTCAATAAAAATAAGAAACTCGTCAAGAAGCTTGCCAAGAAGTACCATGCATTTCTAGCATCTGAAGCTGTCATCAAGCAAATTCCTCGTAAGTTTCCAACACTGGTGACTCATCAAGAATCCTTGGAGTCAAAAATTAATGAAACAAAAGCAATGGTGAAGTTTCAACTTAAGAAAGTTCTTTGTATGGGTGTTGCTGTTGGAAACTGCACAATGGAGGAGAAGCAGATCTTCCAGACCGTGCAACTTAGTGTCAATTTCCTTGTTTCCTTATTAAAGAAGAACTGGCAAAATAGCAAGGACAGAAGTGAGGCCAAAAATTTCAATGCGTCTGAGTGTTTATCTGAGCATGTCTGTGAGGTGCTTATACCTCAAGAGTACTATGGGGAGTGCAATCCGCGTATTTTAGATCCATTTACTTCCGTTCCAGCTAGAGTCATAGTACCAATGGCGACTATCGCTCATGAATACCTTCATGGGAAGGTTGGAAAGTCAAGTTGGCGTAGCATAACTGACGTTGGGTATCAATCTTCATTCATGGACGGAATTTGTCTTGTGAGAGCATTCTATGTCTATGTGCAGCAACTTAAACCACTGGCTTTTCCTCTTTGGCTTGTTAGGCGGGAGTCATATCACTATCATGAGTTAATCTATTTAGCTCTCATCTCTACCAATTACAATTATTAG 852 0.4085 MTLRKTNVSVGFSGSVKLPHIPRPKMKICMLGDAQHGEEAEKIGLDYMDVKGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRKFPTLVTHQESLESKINETKAMVKFQLKKVLCMGVAVGNCTMEEKQIFQTVQLSVNFLVSLLKKNWQNSKDRSEAKNFNASECLSEHVCEVLIPQEYYGECNPRILDPFTSVPARVIVPMATIAHEYLHGKVGKSSWRSITDVGYQSSFMDGICLVRAFYVYVQQLKPLAFPLWLVRRESYHYHELIYLALISTNYNY 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1114 283 CDD Ribosomal_L1 12 153 IPR028364 -
Glsi11g1114 283 Gene3D - 24 108 IPR016095 -
Glsi11g1114 283 SUPERFAMILY Ribosomal protein L1 11 155 IPR023674 -
Glsi11g1114 283 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 12 150 - -
Glsi11g1114 283 Pfam Ribosomal protein L1p/L10e family 12 155 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1114 Glsi-ChrGlsi11 7036617 7038853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1114 12 153 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 84.211 1.74e-72 220