Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1107 ATGGTGGTGGCGGAGGGTGATATGAGCTCCCAAGGCGAAGTGGAATCGCCGTTTCAATCAGATCAACAACACAAGAACCACCCATTCTTATCTATTGGAAGACAATCATCCATATACTCCCTGACCCTTGACGAGTTCCAGCATACCCTCTGCGAGAGTGGCAAGAATTTTGGGTCCATGAACATGGACGAATTCCTCAGCAGCATCTGGAATGCTGAAGAAAACCAAGCCATAAACTCCAACACCAACACCAACATCAACGACGCCTCCGCAGAGAAAGGGATAAGAAAGCAGCCAAGCCTTCCTCGCCAGGGCTCTCTGACCCTTCCTGCGCCGCTGTGTAGGAAAACTGTGGACGAAGTTTGGTCTGAGATACACAAAGCACAACAAGGGCAGCAGCATCCTCAGAGCAATAACGATGTCAATGACAATGTTCTGAACACCGAGTCTACCACACGCGAGCCCACTTTCGGGGAGATGACTTTGGAGGATTTCCTGGTCAAAGCAGGGGTAGTTCGGGAACCATGCCAAATGCCTGCCCCAGCGTCCCGCCAGAAGCAGTACGGGCTGTACCCGAATAACAACTCTACAATGGGGCCCTCCGTGATTGGGATTGGTGGTGGGACAGGTAATGTGGTTGGGTCGTACCAGGCAGTGGCTCAGGGAGGAGGGGCAATTGGGGAGCCTTCTGGGTATCCGCCGCCAGGGGTTTGCCATGGAGGAAGAATGGGGAACGGAGGTAGTGGATATGGGGCGGGGAGTAGAGGAATGGTTGCGCCAGTGAGCTCGATTTCATCGGATGGGCTAGCTACAAGTGAGAAGTCCGCTAGTCAATTTGGGGCGGACATGGGCGTGTTAAGAGGAAGAAAGAGAATCATAGATGGACCGGTGGAAAAGGTGGTGGAGAGAAGACAGAGGAGGATGATAAAGAACAGAGAGTCGGCAGCGAGATCTAGAGCCAGAAAACAGGCATACACTGTTGAATTAGAAGCAGAACTGAACCATTTAAGAGAACAGAACGCCCACCTTCAACAGGCGCTGGCCGAGCTTGAGAGGAGAAGGAAGCAACAGTGTTTTGAAGAATTGAACGGGAAAGTTCATACCAAAGGCCAGAAGGCAAAGGAGAAATTGAGAGCTTTGAGAAGGAGCACAAGTTGTACTTTGTGA 1167 0.515 MVVAEGDMSSQGEVESPFQSDQQHKNHPFLSIGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEENQAINSNTNTNINDASAEKGIRKQPSLPRQGSLTLPAPLCRKTVDEVWSEIHKAQQGQQHPQSNNDVNDNVLNTESTTREPTFGEMTLEDFLVKAGVVREPCQMPAPASRQKQYGLYPNNNSTMGPSVIGIGGGTGNVVGSYQAVAQGGGAIGEPSGYPPPGVCHGGRMGNGGSGYGAGSRGMVAPVSSISSDGLATSEKSASQFGADMGVLRGRKRIIDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNHLREQNAHLQQALAELERRRKQQCFEELNGKVHTKGQKAKEKLRALRRSTSCTL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1107 388 SMART brlzneu 299 363 IPR004827 GO:0003700|GO:0006355
Glsi11g1107 388 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 306 321 IPR004827 GO:0003700|GO:0006355
Glsi11g1107 388 SUPERFAMILY Leucine zipper domain 303 352 IPR046347 GO:0003700|GO:0006355
Glsi11g1107 388 CDD bZIP_plant_BZIP46 303 357 - -
Glsi11g1107 388 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 301 357 - -
Glsi11g1107 388 Coils Coil 326 360 - -
Glsi11g1107 388 Gene3D - 301 352 - -
Glsi11g1107 388 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 33 385 IPR043452 GO:0003700|GO:0045893
Glsi11g1107 388 Pfam bZIP transcription factor 303 351 IPR004827 GO:0003700|GO:0006355
Glsi11g1107 388 MobiDBLite consensus disorder prediction 1 25 - -
Glsi11g1107 388 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 301 353 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1107 Glsi-ChrGlsi11 7004003 7005996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1107 1 358 bZIP Transcription Factor Family AT2G36270 50.472 5.83e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi11g1107 bZIP_1 7.6e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2614 02 75844768 75848776 Glsi11g1107 11 7004003 7005996 CCT