Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1098 ATGGCAGAAGAGCACCGATGCCAAGCTCCCGAAGGCCACCGACTCTGCGCTAACAACTGCGGTTTCTTCGGTAGCCCGACAACCATGAATCTCTGTTCCAAATGCTACAGGGATTTCCATTTGAATGAACAACAAGAAGCCTCTGCCCAATCCACCATCGAAACCGCTCTCTCCACCGCCGCTTCTGCCCCTCTGTCGACGACATCTCCATCGCCGGCCGTTGACTCGCTACCTCCTCTGCTGAAGTTGACATTGCCGGAGGTTGCAGTAGATGGGTCGAGCTCGGCAGTCATAGCCTCTGGACCGGACGTGGCGGTGGCACAACCAAACCGATGTGCGACGTGCCGGAAACGGGTCGGGTTGACGGGGTTCAAGTGCAAGTGCGGTATCACGTTTTGCGGGACCCACAGGTATCCGGAGAAACACGGGTGTAGCTTCGATTTTATGAAGGTGGGACGAGAGGAAATAGCTCGGGCAAATCCTTTGATCAAAGCAGAGAAGCTACAAAAGATTTGA 516 0.5484 MAEEHRCQAPEGHRLCANNCGFFGSPTTMNLCSKCYRDFHLNEQQEASAQSTIETALSTAASAPLSTTSPSPAVDSLPPLLKLTLPEVAVDGSSSAVIASGPDVAVAQPNRCATCRKRVGLTGFKCKCGITFCGTHRYPEKHGCSFDFMKVGREEIARANPLIKAEKLQKI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1098 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Glsi11g1098 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 171 - -
Glsi11g1098 171 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Glsi11g1098 171 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Glsi11g1098 171 FunFam Zinc finger AN1-type containing 6 89 167 - -
Glsi11g1098 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Glsi11g1098 171 Gene3D - 93 167 IPR035896 -
Glsi11g1098 171 SUPERFAMILY AN1-like Zinc finger 105 166 IPR035896 -
Glsi11g1098 171 Gene3D - 1 64 - -
Glsi11g1098 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Glsi11g1098 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Glsi11g1098 171 Pfam AN1-like Zinc finger 112 147 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1098 Glsi-ChrGlsi11 6963812 6964327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1098 1 171 C2H2 Transcription Factor Family AT3G52800 57.627 2.66e-55 170