Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1096 ATGATTGAATTTAAAATGATAGAAAAAAGGGGTTCGCAAGCTGAAGAGCAAAAGGAACGTAAGCAGGTAAAGCTTGGTGAAAGTGCAACAAAAGTGTTGGTTTTTGGGGACTCGTACGCTGACACCGGCAACACAAGAAGAAGGGTATATAGTGCCTGGAAAGAGCCCTATGGAATAACCTTTCCTGCGAAACCCTCCGGTCGATTCTCCGACGGCCGAATCCTCACCGACTATATTGACAAGAACAAAGTGAAGAAATATAATGTATGTGATGATCCCACATCAGCTTTCTTTTGGGATGTGAAGCATCCCGAGCAGGCAGGATGGCATGCCAGAACGAGCAACACAATGATGTTATGGAATTTGCTACAACTCTTCTTCTGTCTCTATTTTCTGCCCGTACTGATCCAAGGATCAAATGAAAATGAAAGAAAGCCATACATTGTATACATGGGACAAGTGCCAGAGGCTACAACCTACGCCGTGGAATCCCACCACTACAACTTGCTGGCTGCTGCAATTGGAGACCACCAGTTAGCCAGAGTCTCCAAAATACATAGCTATGGAAAGAGCTTCAACGGATTCGTAGCAAGACTATTGCCACATGAAGCAGAGAAACTGCTAGAGGAGGACGAGGTGGTATCTGTGTTTCCAAACACCCGACGAAAACTACACACAACAAGGTCATGGGATTTTCTGGGAATGCCCCTAAATGTGAAGAGACGGCCCAACATAGAGAGCCATATCATTGTGGGTGTGTTGGATACAGGAATTTGGATGGATTGCCCAAGTTTCAGCGATAAAGGGTATGGACCTCCCCCACGCAGATGGAAGGGCAAATGTGTACCTGGAGCCAACTTCACCGGCTGCAACAACAAGGTGATCGGAGCAAAATTCTTCAATCTCGACGATATGGATCCCGTTATTGAAAATCCTAGTCCAGTAGATGATCAGGGCCACGGCACTCACACCGCGTCCATCGCGGCCGGCGTGCCGGTGGTGGGAGCCAGTCTCTATGGAATAGGCAAAGGCACCGCTCGCGGTGGAGTCCCATCTGCCCGCATCGCCGTATACAAAGTTTGCTGGAGTATAGGGTGCAGCGACATGGACCTCTTGGCTGGGTTTGACGAGGCCATCGCCGATGGAGTCAACTTCATATCGGTGTCAATAGGGGGGCCATCCAGGGAGTTCTTCAGTGACCCATTAGCTATTGGAGCATTTCATGCTATGAAAAGAGGGGTTCTGACTTCTTGCTCAGCCGGGAATGAAGGTCCTTACACTATGACTGTTGAGAACGTGGCTCCCTGGATTCTTACGGTGGGGGCTTCCGCCATTGATAGGCAGTTCACTACAACGGTAGCTCTCGGTGATGGCAACAAAGCTACTGGACTGTCTATTAATACCTTTTCTCCTAAGAAGAAAATGTACTCTTTGACTAGTGGAGCCCTTGCAGTCAACGGTAGTGGAGACAGTTATGGAAATGCCAGTGCTTGTGATTATGGGACTCTCAGCAAGAACAAGGTGAAGGGCAGGATAGTGTACTGCCTTGGAGGCCTGGGCGGCCAGGACTATAACATCCAAGAATTAGGAGGGGCAGGGACTATCGTGGCCCTTGAAGAGAAAACAGACGTCTCTTTCACCACTGTTATTCCGGGGACCTTTGTGGATGCCTATACTGCAGGCAAAGTCATCCAACTTTACATCAATTCCACTAAAAATGCTCAAGCTGTTATACACAAGACAACAAGTACAAAAATCCCTGCTCCATTTCTTGCTTCTTTCTCATCCAGAGGTCCTCAACTTCTCACGCCCAACATTCTCAAGCCTGACTTAGCCGCTCCGGGACTGGACATACTGGCTGCTTATTCCAAGCTTGCAACACTAACAGGGTACCCTGAAGACAGAAGGCACAACATCTTCAATATAATATCAGGAACATCTATGGCTTGTCCACATGTCACTGCAGCTGCTGCCTACGTCAAATCCTTCCACCCGGATTGGAGTCCTGCTGCAATCAAATCTGCTCTCATGACCACCGCCACTCCCTTGAGAATAGTGAAAGATGAGCTGGCGGAGCTGGGATCTGGGTCAGGACAGATTAATCCAGAAAGAGCAGTGCATCCTGGCCTGGTATACGACATTAGAATAAACTCCTATGCTGCTTTCCTATGCAAGCAAGGTTACAACAGCACCAACATTGGTATACTCTTTGGCAGCAAAAGATTCAATTGCTCCAACGTTAAGACTCCACTGGGCACCGATGGTATTAATTACCCCACCATGCATATCCAGCTCAAGACTGCCAATTCTAGCATCTCAGCAATCTTTCATCGGAGGGTGACTAATGTAGGATATGGCCCTTCAACGTACAAGGCTAAAGTCAAAACACCTCGGGGTCTTTCCGTGGAAGTTAACCCTGATACCTTGCAGTTTAGTCGATTGCATCAAAAGCAGTCATTCAAGGTTGTCCTGAAGGGGCCTCCAATGCCAAAGGAGACAAACATATTATCTGCCTTACTTGATTGGAATGACTCTAAACATAGTGTTAGAAGTCCTATTCTTGTCTATAGGCCGCTGTTCCAGACAGGTGGAACTTAA 2598 0.4769 MIEFKMIEKRGSQAEEQKERKQVKLGESATKVLVFGDSYADTGNTRRRVYSAWKEPYGITFPAKPSGRFSDGRILTDYIDKNKVKKYNVCDDPTSAFFWDVKHPEQAGWHARTSNTMMLWNLLQLFFCLYFLPVLIQGSNENERKPYIVYMGQVPEATTYAVESHHYNLLAAAIGDHQLARVSKIHSYGKSFNGFVARLLPHEAEKLLEEDEVVSVFPNTRRKLHTTRSWDFLGMPLNVKRRPNIESHIIVGVLDTGIWMDCPSFSDKGYGPPPRRWKGKCVPGANFTGCNNKVIGAKFFNLDDMDPVIENPSPVDDQGHGTHTASIAAGVPVVGASLYGIGKGTARGGVPSARIAVYKVCWSIGCSDMDLLAGFDEAIADGVNFISVSIGGPSREFFSDPLAIGAFHAMKRGVLTSCSAGNEGPYTMTVENVAPWILTVGASAIDRQFTTTVALGDGNKATGLSINTFSPKKKMYSLTSGALAVNGSGDSYGNASACDYGTLSKNKVKGRIVYCLGGLGGQDYNIQELGGAGTIVALEEKTDVSFTTVIPGTFVDAYTAGKVIQLYINSTKNAQAVIHKTTSTKIPAPFLASFSSRGPQLLTPNILKPDLAAPGLDILAAYSKLATLTGYPEDRRHNIFNIISGTSMACPHVTAAAAYVKSFHPDWSPAAIKSALMTTATPLRIVKDELAELGSGSGQINPERAVHPGLVYDIRINSYAAFLCKQGYNSTNIGILFGSKRFNCSNVKTPLGTDGINYPTMHIQLKTANSSISAIFHRRVTNVGYGPSTYKAKVKTPRGLSVEVNPDTLQFSRLHQKQSFKVVLKGPPMPKETNILSALLDWNDSKHSVRSPILVYRPLFQTGGT 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1096 865 MobiDBLite consensus disorder prediction 1 20 - -
Glsi11g1096 865 Gene3D SGNH hydrolase 17 88 IPR036514 -
Glsi11g1096 865 CDD PA_subtilisin_like 452 578 - -
Glsi11g1096 865 Gene3D Peptidase S8/S53 domain 249 719 IPR036852 GO:0004252|GO:0006508
Glsi11g1096 865 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 147 854 IPR045051 -
Glsi11g1096 865 Pfam Fibronectin type-III domain 756 855 IPR041469 -
Glsi11g1096 865 Pfam Peptidase inhibitor I9 147 225 IPR010259 -
Glsi11g1096 865 ProSitePatterns Serine proteases, subtilase family, serine active site. 645 655 IPR023828 -
Glsi11g1096 865 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 135 225 IPR037045 -
Glsi11g1096 865 Pfam Subtilase family 247 683 IPR000209 GO:0006508|GO:0008236
Glsi11g1096 865 SUPERFAMILY Subtilisin-like 224 710 IPR036852 GO:0004252|GO:0006508
Glsi11g1096 865 Gene3D - 446 584 - -
Glsi11g1096 865 PRINTS Subtilisin serine protease family (S8) signature 246 265 IPR015500 -
Glsi11g1096 865 PRINTS Subtilisin serine protease family (S8) signature 316 329 IPR015500 -
Glsi11g1096 865 PRINTS Subtilisin serine protease family (S8) signature 644 660 IPR015500 -
Glsi11g1096 865 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 251 261 IPR023827 -
Glsi11g1096 865 FunFam Subtilisin-like protease SBT1.5 248 460 - -
Glsi11g1096 865 Gene3D - 723 857 - -
Glsi11g1096 865 CDD Peptidases_S8_3 223 681 IPR034197 -
Glsi11g1096 865 ProSiteProfiles Serine proteases, subtilase domain profile. 229 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1096 Glsi-ChrGlsi11 6947456 6953681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1096 122 679 Subtilisin-like Serine Gene Family AT5G03620 61.620 0.0 684