Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1076 ATGGAGGGTTTCATAGAAAAGAGAAAGCATGTGAAGAAAAAGTTTAATACGAATCCTTTACAAAGAGGGGCAAAGAAAGAAAGATCCAGTCACCTGATCCTAGGGGCGGACACCACTCTGCAATGGCGAATTTTAGGGTTTTGTGAACAACGGATACGAACAGTCTCCATGGAAATGCCCGGTAGAAGATCCAACTACACACTCCTGAGCCAAAGTCCTGATGACCAGTTCGGTGGCGGAGCAGCCTTGTCCGGACCATCTGCTTCCACTTCGTTATTCGACTCTTCATCCGGGGACGGGAAGAACAATAAAGGCAAGGTAGACAGAGGGTACAATTGGGACTTAGTTGCTGATCATAGGGTCACTCAGCAGGGAAACCGGATCGGGAATTTATACTCATCGATCGGCTTGCAGAGACAGTCTAGTGGTAGCAGTTTTGGTGAAAGCTCGCTCTCCGGGGAGTATTATGCTCCAACCCTATCGACGGCAGCCGCGAATGAGATCGACACCTTTGGATACATGCATGATGATGGATTCAAGGTTGGTGGAGGCGACTTTAGAAACAAGTTGACGGAGACTACGGTGAGGATGGGAGGGTCGTCATCAGGTAAAAGTTGGGCGCAGCAAACGGAGGAAAGTTACCAATTGCAGCTGACTTTGGCACTTCGGCTTTCGTCTGAGGCAACACGTGCTGATGATCCCAATTTCCTGGATCCAGTACCAGATGAATCCGCTTTAAGGTCATCGTCAAGTTCGGCAGAGGCACTATCACATAGATTCTGGGTGAATGGCTGCTTATCATACTTCGACAAAATTCCTGATGGCTTTTACCTAATTTATGGGATGGATCCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAATGGTCGAATTCCTTCGATTGAGTCTCTAAAATCTGTAGATCCCCACGCTGATTCTTCACTTGAAATAGTTTTGGTGGATCGACGTAGTGATCCTAGCTTAAAGGAACTCCAAAATAGAGTACATAGTATTTCTTGCAACTGCATAACCACAACAGAGGTTGTAGACCATCTTGCGAAGTTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTTTTTCCATCTGGAGGGAGTGCAGTAATGATCTTAAAGAATGCTTGGGATCTGTTGTTGTTCCAATAGGCAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCTGCATTATTCAAAGTACTAGCTGACATCATTGATTTACCATGTCGAATTGCTAAGGGCTGTAAATATTGCTCAAGAGATGATGCTTCCTCTTGTCTTGTCCAATTTGGGCTTGACAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTACTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTTTCGGATTGTCTGTCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGAGCAGTTTGATGGCAAGTGCAGGGACAGAAATAATCCTAGGCCAATTTCAAATGACAGCAACAGAACTTCTTGTCTGTCTCTGCATCCACAAGTTTCCCATTTAGGAGCTCAAGATCAGGGTTTTGAAACATTTAGGTCATGCAACCCTCCTCAGAACATTGTAGACTCAACAACTATGGGCAAGGATCCATTGCCTATTAAACATAACCGACCTGTTGGGTATGGAGGTAATCAAACCGCTATAACATTGACAAATTCAAATGTGGATGCTATTGAGGGTAGGAGGTTTACTGAAGGAAATCAACTGGTTCCTAGCAAAGCCAGTAGAGAGCTTACACTTGATATGGACGATTTGGAAATATCTTGGAGCAGTCTTGTTTTAAAAGAGAGAATAGGATCAGGTTCTTTTGGAACAGTACATCGTGCTGAGTGGAATGGCTCGGAAGTTGCTGTGAAAATTTTAATGGAACAAGATTTTCATGCTGAGCGTTTCAAGGAATTTCTGAGGGAGGTTGCGATAATGAAACGCTTGCGGCATCCAAACATAGTTTTATTTATGGGCGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACAGAATATTTGTCTAGGGGCAGCTTATACAGGCTGTTGCATAAACCTAGTGCCCGAGAGATGTTGGATGAGAGGCGTAGGCTGAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGTAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGTCTTTCCCGTCTAAAGGCAAATACTTTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCCCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCAGATGTTTACAGCTTTGGAGTAATCTTGTGGGAGCTTGCAACTTTGCAACAGCCATGGAGCAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGAGATCCCACGTGATTTGAATCCCCAAGTAGCTGCAATGATTGAGGCTTGCTGGGCCAATGAGCCACGGAAGCGTCCTTCTTTTTCAAGTATCATGGATTCTTTGAGACAGTTGATAAAACCCCCTACACCTCAACCTGGTCGCCCGAACATATCATTACTCACCTGA 2745 0.4474 MEGFIEKRKHVKKKFNTNPLQRGAKKERSSHLILGADTTLQWRILGFCEQRIRTVSMEMPGRRSNYTLLSQSPDDQFGGGAALSGPSASTSLFDSSSGDGKNNKGKVDRGYNWDLVADHRVTQQGNRIGNLYSSIGLQRQSSGSSFGESSLSGEYYAPTLSTAAANEIDTFGYMHDDGFKVGGGDFRNKLTETTVRMGGSSSGKSWAQQTEESYQLQLTLALRLSSEATRADDPNFLDPVPDESALRSSSSSAEALSHRFWVNGCLSYFDKIPDGFYLIYGMDPYVWTVCTDLQENGRIPSIESLKSVDPHADSSLEIVLVDRRSDPSLKELQNRVHSISCNCITTTEVVDHLAKLVCNRMGGSASVGEDDFFSIWRECSNDLKECLGSVVVPIGSLSVGLCRHRAALFKVLADIIDLPCRIAKGCKYCSRDDASSCLVQFGLDREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNDSAEQFDGKCRDRNNPRPISNDSNRTSCLSLHPQVSHLGAQDQGFETFRSCNPPQNIVDSTTMGKDPLPIKHNRPVGYGGNQTAITLTNSNVDAIEGRRFTEGNQLVPSKASRELTLDMDDLEISWSSLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPSAREMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQVAAMIEACWANEPRKRPSFSSIMDSLRQLIKPPTPQPGRPNISLLT 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1076 914 ProSitePatterns Protein kinases ATP-binding region signature. 646 667 IPR017441 GO:0005524
Glsi11g1076 914 Gene3D Transferase(Phosphotransferase) domain 1 719 904 - -
Glsi11g1076 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Glsi11g1076 914 SUPERFAMILY Protein kinase-like (PK-like) 622 893 IPR011009 -
Glsi11g1076 914 Gene3D Phosphorylase Kinase; domain 1 633 718 - -
Glsi11g1076 914 FunFam Serine/threonine-protein kinase CTR1 719 904 - -
Glsi11g1076 914 Pfam Ethylene-responsive protein kinase Le-CTR1 253 459 - -
Glsi11g1076 914 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 231 897 - -
Glsi11g1076 914 ProSiteProfiles Protein kinase domain profile. 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1076 914 CDD STKc_MAP3K-like 646 894 - -
Glsi11g1076 914 MobiDBLite consensus disorder prediction 88 108 - -
Glsi11g1076 914 MobiDBLite consensus disorder prediction 518 537 - -
Glsi11g1076 914 Pfam Protein tyrosine and serine/threonine kinase 641 894 IPR001245 GO:0004672|GO:0006468
Glsi11g1076 914 PRINTS Tyrosine kinase catalytic domain signature 714 727 IPR001245 GO:0004672|GO:0006468
Glsi11g1076 914 PRINTS Tyrosine kinase catalytic domain signature 821 843 IPR001245 GO:0004672|GO:0006468
Glsi11g1076 914 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672|GO:0006468
Glsi11g1076 914 PRINTS Tyrosine kinase catalytic domain signature 755 773 IPR001245 GO:0004672|GO:0006468
Glsi11g1076 914 PRINTS Tyrosine kinase catalytic domain signature 802 812 IPR001245 GO:0004672|GO:0006468
Glsi11g1076 914 SMART serkin_6 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1076 914 FunFam Serine/threonine-protein kinase isoform 1 630 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1076 Glsi-ChrGlsi11 6758082 6766068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1076 57 910 MAP Kinase Kinase Kinase AT5G03730 68.166 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Glsi11g1076 PK_Tyr_Ser-Thr 5.8e-72 CL0016