Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1063 ATGGCAAATCAACTAAGAATCTCAAATAGCGTTGCTACTTTGCTTTGCCTTTGGCCTAAACCTATCAACTGGAGGCTCTCACAATGCATCTGGTCTCTTGGGAATCCACTTTTCATTTTTGTTATTTTCCCCGATCCATGCTCAAACGTGTTGGTTCCTAAAAAGGGTTATGGCAATCTCCTTCTCCTTCTATTAATTTCAAAACGCTGCCATCATTTCCCCTTCCCGCCTGAGCACCGAGACAAAGCTCCCCATAACATGTACAAGCCTCGTCCCATAAACCTGGCCTTGGTCTTGGCATTCCTCTGTCTCCCACCATCCCTTGGTCTAACCCAGAATGACACCCACGCCCTCACCCTTTTCCGCCTCCAAGCCGACGCCCACGGCTACCTTCTCGCCAACTGGACAGGCGCCGACGCTTGCACCGCCAACTGGCACGGCGTTCAATGCTCCCCTAATGGCCGACTTGTCGGCCTTTCGCTTCCTTCCCTCAATCTCCGAGGTCCTCTTGATTCTCTATCCCCTCTCAGCTACTTGCGCCTCCTTGACCTCCACGATAATCGCTTAAACGGCAGCATTACTCCTCTTTCTAACTGCACCAGCCTCGAGCTCCTTTATCTCGCCGGCAATGACTTCTCCGGCAAGATACCACCGGAGATAGCTTCACTCACGCGTCTACTCAGGCTTGACCTCTCCGACAACAACATCCGAGGCCCAATTCCCAAGGAGCTGTCCAAATTGACTGCGCTTCTTACGCTTCGGATACAGAACAACGTGCTTTCTGGGCAAATTCCCGATCTCTCTGTTTCTCTGGTCAATCTCAAGGAGCTCAATATGACCAACAACGAGTTTTACGGAGACTTACCCGATGGTATGCTGAAGAAATTCGGTGATGTGAGCTTTTCTGGGAATGAAGGTCTATGCGGGTCGAGCCCATTGCCAGTTTGTTCCTCCCCTGAGAATCCTCCTTCGGCGTCGACTCCAACAGTTCCTTCCAGCCCGAGCTCGTTGCCCCAAACAAGCGTAGTTACTCCGCCTAAAAGCCAACCGCGAAAGGGGTTGAGTCCCGGAGTTATAGTAGCCATTGTGGTAGCAAATTGTGTGGCATTGCTGGTGATAACCTCTTTCATCGTGGCTCACTGTTGCGCCAGAGGACGAAGCTCCAATTCGATGGTGGGCAGTGAGGCTGGGAAGAGGAAAAGTGGTAGCAGCTATGGAAGTGACAAGAAGGTGTATACCAATGGGGGCGGAGATAGTGATGGTACTACTGAGACAGACCGAAGCAAGCTGGTTTTCTTTGATAGAAGGAGTCAATTTGAGCTCGAGGATTTACTCCGTGCGTCGGCGGAGATGCTCGGGAAAGGAAGCTTGGGGACAGTTTATAGGGCAGTGCTTGATGATGGATGTACCGTAGCCGTGAAGAGGCTCAAGGACGCAAACCCGTGCGCGAGGAAGGAATTCGAGCAATACATGGATGTGATTGGAAAGCTGAAGCACCCCAACATTGTGAGACTGAGAGCCTATTACTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCCAACGGAAGCTTGCATTCTCTTCTTCACGGGAACCGTGGTCCAGGAAGAATCCCATTAGATTGGACAACACGAATAAGCTTGGTGTTAGGGGCGGCCAGAGGAGTAGCTCGGATTCATGCAGAATATAGTGCAGCAAAAATACCTCATGGGAACATCAAATCTTCCAACGTGCTTCTCGACAAGAATGGTGTTGCTTGTATCTCTGACTTTGGCTTGTCCCTGCTACTGAACCCTGCTCATGCCATTGCAAGATTGGGTGGATACAAAGCTCCGGAACAAGCAGAAGTGAAGAGGCTGTCTCAGCAGGCAGACGTGTATAGTTTTGGGGTCTTGCTGTTGGAAGTTCTTACAGGGAGAAGTCCCTTACAGTCACAGAACCCTTCGCCAACTCGTCCCAGGTTGGATGAAGTGGAACAAGGAGTGGATCTGCCGAAATGGGTGCGGTCTGTAGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTGTTGCGGTACAAGAACATTGAGGAAGAGCTGGTGTCGATGCTGCACGTGGGGTTGGCTTGTGTGGTGGCAGAAGCAGAGAAGAGGCCAACTATGGCGGACGTTGCTAAGATGATAGAGGACATCAGGGTGGAGCAATCTCCTCTGGGAGAGGATTATGATGAGTCACGCAATTCACTTTCACCTTCCCTTCCCACCACAGAAGATGGGCTATCTTAA 2277 0.5055 MANQLRISNSVATLLCLWPKPINWRLSQCIWSLGNPLFIFVIFPDPCSNVLVPKKGYGNLLLLLLISKRCHHFPFPPEHRDKAPHNMYKPRPINLALVLAFLCLPPSLGLTQNDTHALTLFRLQADAHGYLLANWTGADACTANWHGVQCSPNGRLVGLSLPSLNLRGPLDSLSPLSYLRLLDLHDNRLNGSITPLSNCTSLELLYLAGNDFSGKIPPEIASLTRLLRLDLSDNNIRGPIPKELSKLTALLTLRIQNNVLSGQIPDLSVSLVNLKELNMTNNEFYGDLPDGMLKKFGDVSFSGNEGLCGSSPLPVCSSPENPPSASTPTVPSSPSSLPQTSVVTPPKSQPRKGLSPGVIVAIVVANCVALLVITSFIVAHCCARGRSSNSMVGSEAGKRKSGSSYGSDKKVYTNGGGDSDGTTETDRSKLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKHPNIVRLRAYYYAKEEKLLVYDYLSNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGVARIHAEYSAAKIPHGNIKSSNVLLDKNGVACISDFGLSLLLNPAHAIARLGGYKAPEQAEVKRLSQQADVYSFGVLLLEVLTGRSPLQSQNPSPTRPRLDEVEQGVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVAEAEKRPTMADVAKMIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1063 758 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Glsi11g1063 758 SUPERFAMILY Protein kinase-like (PK-like) 450 725 IPR011009 -
Glsi11g1063 758 ProSiteProfiles Protein kinase domain profile. 446 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1063 758 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 98 730 IPR046959 -
Glsi11g1063 758 Pfam Leucine rich repeat N-terminal domain 113 151 IPR013210 -
Glsi11g1063 758 CDD STKc_IRAK 452 728 - -
Glsi11g1063 758 Gene3D Transferase(Phosphotransferase) domain 1 522 745 - -
Glsi11g1063 758 FunFam Nuclear pore complex protein NUP107 111 266 - -
Glsi11g1063 758 FunFam pollen receptor-like kinase 1 417 521 - -
Glsi11g1063 758 Pfam Protein kinase domain 450 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1063 758 SUPERFAMILY L domain-like 114 308 - -
Glsi11g1063 758 MobiDBLite consensus disorder prediction 387 421 - -
Glsi11g1063 758 Gene3D Ribonuclease Inhibitor 222 322 IPR032675 -
Glsi11g1063 758 MobiDBLite consensus disorder prediction 330 348 - -
Glsi11g1063 758 MobiDBLite consensus disorder prediction 312 353 - -
Glsi11g1063 758 Gene3D Phosphorylase Kinase; domain 1 418 521 - -
Glsi11g1063 758 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 522 737 - -
Glsi11g1063 758 MobiDBLite consensus disorder prediction 739 758 - -
Glsi11g1063 758 MobiDBLite consensus disorder prediction 387 424 - -
Glsi11g1063 758 Gene3D Ribonuclease Inhibitor 113 221 IPR032675 -
Glsi11g1063 758 MobiDBLite consensus disorder prediction 732 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1063 Glsi-ChrGlsi11 6671551 6676444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1063 107 754 Receptor kinase-like Gene Family AT2G36570 67.862 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi11g1063 Pkinase 2.5e-34 CL0016