Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1045 ATGGAACTCTCACTATTCCGTCATCAGCACCATCACACGATCCTCCATTGCCCTCTAAGCTCCATTCTCTCTGCAAGGACGAAACACGAGACATTTTATAAAAAAAGTTCATATAGTTTACCCTGCCGCTGCTCATATTCTTCCCCGGATAAAACTGCTGCAGAATCAGCCACTCTATCTTTACAGATTGAGGGAAGGAGGGCATTACTCACTACTCTCCTCACAACTGCTACTGGAGTTTATGCATGTAATGTGGCTGGAGCAGTAAGCACAAGTAGAAGAGCCCTACGAGGAGCAAAAATTCCAGAAAGTGAATTCAAATCCCTGCCTAATGGTCTTAAGTATTACGATTTGAAGGTTGGGAGTGGAGCTGAGGCCGTGAAGGGATCCCGTGTTGCTGTTCACTACGTTGCTAAATGGAAGGGTATCACCTTTATGACTAGCAGACAAGGAATGGGTGTCGGAGGAGGAACGCCATATGGATTTGATGTAGGCCAATCTGAAAACGGAACCGTCCTTAAAGGGTTAGATTTAGGGGTGCAAGGCATGCGAATAGGCGGCCAGCGGTTGTTAATTGTTCCTCCTCAATTGGCCTATGGAAGCAAAGGAGTCCAGGAGATCCCTCCAAATGCGACGATAGAGTTAGATGTTGAACTGCTTTCCATCAAACAAAGCCCATTTGGGACTGCGGTCAAGATTGTTGAAGGTTAA 711 0.4613 MELSLFRHQHHHTILHCPLSSILSARTKHETFYKKSSYSLPCRCSYSSPDKTAAESATLSLQIEGRRALLTTLLTTATGVYACNVAGAVSTSRRALRGAKIPESEFKSLPNGLKYYDLKVGSGAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSENGTVLKGLDLGVQGMRIGGQRLLIVPPQLAYGSKGVQEIPPNATIELDVELLSIKQSPFGTAVKIVEG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1045 236 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 125 220 IPR001179 GO:0003755
Glsi11g1045 236 Gene3D - 89 230 IPR046357 GO:0003755
Glsi11g1045 236 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 102 231 - -
Glsi11g1045 236 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 129 223 IPR001179 GO:0003755
Glsi11g1045 236 SUPERFAMILY FKBP-like 101 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1045 Glsi-ChrGlsi11 6572152 6575951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1045 118 222 Calmodulin-binding Proteins AT5G48570 31.818 2.84e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g1045 11 6572152 6575951 Glsi11g1045 11 6572152 6575951 ECH