Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1035 ATGTTGGCGCCTCCATGGCTTGAACCACTGCTAAACACATCGTTTTTCAGCGTCTGCCAGATTCACGGAGACGCAGCAAGGAGCGAGTGTAACATGTATTGCCTGGACTGCAATGGGGACGCATTTTGCTTTTATTGCCGTTCATCAAGACACAGGGATCATCAAGTTATTCAGATAAGACGATCTTCGTATCACGATGTAGTTCGGGTGGCAGAGATTCAGAAGGCGTTGGATATAAGCGGAGTACAGACGTATGTGATAAACAGTGCTAGAGTACTGTTTCTGAATGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCATATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTTTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAAAGAAATGGGGATGCAAGCTTTGATTTGGATGCTAAGAATGAGACATTGTCAAACAATTCAAAGGGATCGGTGTCTTACAGACAACAACAAGAAGAATTGCGTGAAGGCTCACAACAAGATATGTACCCCCCCACGCCTCCTCCACCTCCAGCTTCAACTGCAAGGAGAAGAAAAGGCATTCCCCATAGAGCTCCTTTTGCCTCCTAA 612 0.4542 MLAPPWLEPLLNTSFFSVCQIHGDAARSECNMYCLDCNGDAFCFYCRSSRHRDHQVIQIRRSSYHDVVRVAEIQKALDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFDLDAKNETLSNNSKGSVSYRQQQEELREGSQQDMYPPTPPPPPASTARRRKGIPHRAPFAS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1035 203 Gene3D Classic Zinc Finger 14 79 - -
Glsi11g1035 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 201 - -
Glsi11g1035 203 MobiDBLite consensus disorder prediction 153 171 - -
Glsi11g1035 203 MobiDBLite consensus disorder prediction 153 203 - -
Glsi11g1035 203 Pfam PLATZ transcription factor 60 131 IPR006734 -
Glsi11g1035 203 SUPERFAMILY B-box zinc-binding domain 17 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1035 Glsi-ChrGlsi11 6509768 6510883 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi11g1035 PLATZ 2.2e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2702 02 76496830 76497954 Glsi11g1035 11 6509768 6510883 CCT