Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1032 ATGGCGTGCCCACTCTGTCTCTCGTCTATCTCTCTATCCCCTCTCCACAGAACTAGTTCTCTCACTCTAAAATCTTATCCACTTCACCCTCTCTCCGTCAAATCCTCCGTTGAAAAAAACCCCACCAATAATTCTAACACCACCAACACCACCAACAGTAGCAATAAATCCAGTTCCTGGGTCAGCCCTGATTGGCTCACTTCCTTGTCTAGGTCCCTGACCTTAGGGAAAGACGATTCCGGCATTCCTATAGCCAGTGCGAAACTTGACGATGTTTCTGATCTTCTTGGCGGTGCTCTTTTTCTCCCACTGTTCAAATTGATGAATGAGTATGGGTCCATTTATCGATTAGCGGCGGGGCCTAGAAATTTTGTGGTTGTTAGTGACCCTGCAATCGCGAAGCATGTGCTCAGGAATTACGGTATATATGCTAAAGGTCTCGTCTCCGAGGTATCAGAGTTCCTTTTTGGGTCAGGTTTTGCAATTGCTGAAGGACCGCTCTGGACGGCTAGGCGCAGGGCTGTGGTTCCATCTCTTCACAAACGGTACTTGTCTATTATAGTGGATCGCGTATTTTGTAGATGTGCCGAGAGACTAGTGGAGAAGCTACAAGCTGATGCATTGAATGGAAATGCTGTTAACATGGAGGAAAGTCCTGTTATTGATGCTGTTTACACTGCATTGAAAGAGGCAGAGGCTCGTTCAACTGATATTTTGCCATATTGGAAGGTTAAAATTCTTTGTAAGATAATCCCAAGACAAATAAAAGCTGAAAAAGCTGTATACGTTATTAGGAAAAGTGTTGAAGAACTTATTATAAAATGTAAAGAGATTGTGGAAGCCGAGGGTGAAAGAATTGATGATGGTGATGAATATGTGAATGACACTGATCCTAGTATCCTCCGGTTCTTGCTTGCTAGCAGAGAAGAGGTTTCCAGTCTGCAGTTACGTGATGATCTTTTGTCACTATTAGTTGCTGGCCACGAGACCACTGGTTCAGTGCTGACCTGGACACTTTATCTTCTAAGTAAGGATCCTTCCTCATTGACAAAAGCACAAGAAGAGGTAGACAGAGTTTTACGGGGAAAATGTCCTACCTATGAAGACATTAAAGATCTTAAATTCTTGACACGCTGCATTATTGAGTCACTCCGGCTCTATCCACATCCTCCTGTCTTGATAAGAAGAGCGAAAGTTCCTGATGTGCTTCCTGGCGCTTACAAGGTTGATGCTGGTCAAGATATTATGATTTCTGTATATAACATACATCATTCTTCAGAGGTTTGGGAGAGGGCGGAAGAGTTTTTGCCAGAAAGGTTTGATTTGGATGGGCCAGTACCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCGGTGGAGGACCCCGCAAGTGTGTTGGCGATCAGTTTGCTTTATTGGAAGCAACAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTTGAGCTGGTTCCTGATCAGAATATTAGTATGACTACAGGAGCAACTATACATACAACAAATAAAACTTACGGAGAACCAAAAGCATCTTATTCTCAAGTAATTGTTGGGCTTATACATGAAACTAAGCCGACGGCAAAAATAGTTGACATTTTATTCATCTTCTTCAGACAAGCTTTGGTAAGTGCTCCAAAGAAGATTAATTAA 1671 0.4243 MACPLCLSSISLSPLHRTSSLTLKSYPLHPLSVKSSVEKNPTNNSNTTNTTNSSNKSSSWVSPDWLTSLSRSLTLGKDDSGIPIASAKLDDVSDLLGGALFLPLFKLMNEYGSIYRLAAGPRNFVVVSDPAIAKHVLRNYGIYAKGLVSEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSIIVDRVFCRCAERLVEKLQADALNGNAVNMEESPVIDAVYTALKEAEARSTDILPYWKVKILCKIIPRQIKAEKAVYVIRKSVEELIIKCKEIVEAEGERIDDGDEYVNDTDPSILRFLLASREEVSSLQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDPSSLTKAQEEVDRVLRGKCPTYEDIKDLKFLTRCIIESLRLYPHPPVLIRRAKVPDVLPGAYKVDAGQDIMISVYNIHHSSEVWERAEEFLPERFDLDGPVPNETNTDFRFIPFGGGPRKCVGDQFALLEATVALAIFLQHMNFELVPDQNISMTTGATIHTTNKTYGEPKASYSQVIVGLIHETKPTAKIVDILFIFFRQALVSAPKKIN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1032 556 PANTHER CYTOCHROME P450 FAMILY 4 104 492 - -
Glsi11g1032 556 Pfam Cytochrome P450 229 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 Pfam Cytochrome P450 102 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 Gene3D Cytochrome P450 83 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS E-class P450 group I signature 108 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 MobiDBLite consensus disorder prediction 34 62 - -
Glsi11g1032 556 CDD CYP97 102 509 - -
Glsi11g1032 556 MobiDBLite consensus disorder prediction 35 62 - -
Glsi11g1032 556 SUPERFAMILY Cytochrome P450 96 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1032 556 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1032 Glsi-ChrGlsi11 6491041 6496558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1032 23 512 Cytochrome P450 AT3G53130 74.468 0.0 783