Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1002 ATGATCTTTGGGTTTCCTCCACTTTCTGTGCTTCTCTTAGACCCAGTCGTATTAGAAGCCACTGGATCTCTGATGGCCATTCCCCCATTCTGTCCAGGCTTTTCCTCGGTAACACAGTGCACTGGTCTTACAGATCGACGTCCTCCTTTTCCTCTGAAACTAACGGGGAAAATGGTGGTTGCAGAGTTCGCTGGTGGTGGCTGGAGAGAAATGAAAAGCTTCGGCCTCCGCGTTCTCACCGGCCGCTGGTTCATGGTCTTTGCCTCTTTACTAATCATGGCTGTCGCGGGGGCAACCTATATGTTTGGTTTATACTCAAACGACGTCAAAACCTCTCTAGGCTACGACCAGACCACTCTCAACTTGCTAAGCTTCTTTAAGGACTTGGGTGGCAATGTCGGCGTCTTATCCGGGTTGATCAATGAGATCACCCCGCCCTGGGTCGTCCTCTCAACTGGGGCCGTTATGAACTTCTTCGGCTACTTCATGATATGGCTTGCCGTTACTGGACGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATCTGCATTGGCGCAAATTCACAGTCTTTTGCCAATACGGGTGCCTTAGTCACCTGCGTTAAGAACTTCCCGGGAAGCCGTGGCAGCGTTTTGGGCCTGCTCAAGGGTTATGTTGGTCTGAGCGGTGCCATTTTGACACAGCTATACCATGCCTTCTATGGCGACAACTCCAAATCTCTTATCTTGCTCATTGCTTGGCTTCCTGCCGCTGTTTCCTTCGTTTTCCTTCCAACAATTCGGATATTAAACACAACACGACAACCCAAGGAGCTCAAAGTATTCTATAATCTTCTATATATTTCACTGGGCCTAGCTGGGTTTCTCATGATATTGATCATTGTACAGAACAAGTTGAGCTTCTCTGAGATCGAATACGTGGTCGATGGCATTGTGATTCTTTTCTTACTTTTTCTCCCACTTACTGTGGTTTTCAGAGAGGAATTCTACCTCTGGAGGGCCAGAAAGGAAGCCTTGAGTGATGCTTCCGAACTGAAAGTAGTCACTGAAGTTCCACCTCCGATGGAATTAGCGCAGCCACAGCAACAAGCAGCCCCGGCTCCCACTATTAGCACAAGCCCGCAGAAGGAAAGTTCTTGTGCAAGCAATATTTTCAAACCACCAAACAGGGGCGAGGACTACACCATTTTGCAAGCCCTGTTCAGCATTGACATGTTAATTCTGTTCATTGCAACAACTTTCGGTGTTGGTGGGACATTAACGGCGATTGACAATTTGGGACAGATTGGGAACTCACTGGGATACCCAAGTAGGAGCACCACCACCTTTGTGTCCTTAGTGAGCATATGGAACTATCTGGGACGAGCAGTCGCTGGCTTTGCATCCGAAATTTTCTTGACCAAATACAAGTTCCCTCGTCCCTTGATGCTCACTCTGGTTATGCTTCTCTCATGTATTGGCCATCTTCTGATTGCCTTTGGCGTCCCCAACTCTCTCTACTTCGCTTCTGTGATCATTGGGTTTTGCTTTGGAGCCCAATGGCCGTTGATGTTTGCGATCATATCCGAAATATTTGGCCTGAAATACTACTCTACTTTATACAATCTCGGAGCGGTGGCAAGCCCAGTTGGATCTTACGTACTGAACGTGAGAGTGACAGGTTATTTATACGACAGAGAGGCTTTGAAGCAATTAGAGGCAAAGGGCCTCACAAGGCAAGCAGGGGAAGACTTAACTTGCTTAGGAGCACACTGCTATAGGATGGCTTTTATCATAATCGCTGCATCAACGTTGGTTGGGTGCTTTGTTTCTTTCATTTTGGTGCTCAGAACTAGAAAGTTCTACCAAGGCGACATATACAGAAAGTTCAGAGCAGAAGGAGAAGCTGAGGTGGCAACTACCAAAAGTGGCACTGTTCCGTTAGACACAGATTGCCATGCAACCTTAAACGGCACGGAAGAATTAGATAAAAACAATAGAAAGTGA 1992 0.4719 MIFGFPPLSVLLLDPVVLEATGSLMAIPPFCPGFSSVTQCTGLTDRRPPFPLKLTGKMVVAEFAGGGWREMKSFGLRVLTGRWFMVFASLLIMAVAGATYMFGLYSNDVKTSLGYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLSTGAVMNFFGYFMIWLAVTGRIAKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPGSRGSVLGLLKGYVGLSGAILTQLYHAFYGDNSKSLILLIAWLPAAVSFVFLPTIRILNTTRQPKELKVFYNLLYISLGLAGFLMILIIVQNKLSFSEIEYVVDGIVILFLLFLPLTVVFREEFYLWRARKEALSDASELKVVTEVPPPMELAQPQQQAAPAPTISTSPQKESSCASNIFKPPNRGEDYTILQALFSIDMLILFIATTFGVGGTLTAIDNLGQIGNSLGYPSRSTTTFVSLVSIWNYLGRAVAGFASEIFLTKYKFPRPLMLTLVMLLSCIGHLLIAFGVPNSLYFASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGAVASPVGSYVLNVRVTGYLYDREALKQLEAKGLTRQAGEDLTCLGAHCYRMAFIIIAASTLVGCFVSFILVLRTRKFYQGDIYRKFRAEGEAEVATTKSGTVPLDTDCHATLNGTEELDKNNRK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1002 663 MobiDBLite consensus disorder prediction 364 381 - -
Glsi11g1002 663 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 83 623 - -
Glsi11g1002 663 FunFam Nodulin family protein 398 619 - -
Glsi11g1002 663 Pfam Nodulin-like 82 327 IPR010658 -
Glsi11g1002 663 Gene3D MFS general substrate transporter like domains 395 617 IPR036259 -
Glsi11g1002 663 CDD MFS_Mch1p_like 81 603 - -
Glsi11g1002 663 SUPERFAMILY MFS general substrate transporter 82 617 IPR036259 -
Glsi11g1002 663 MobiDBLite consensus disorder prediction 360 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1002 Glsi-ChrGlsi11 6326764 6329003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1002 59 628 Nodulin-like Gene Family AT2G39210 67.951 0.0 790
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g1002 11 6326764 6329003 Glsi12g0788 12 25198849 25200630 ECH
Glsi11g1002 11 6326764 6329003 Glsi11g1002 11 6326764 6329003 ECH