Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0987 ATGGCGAAGTGCTTCGATCCCAAAACTTTGACGTATTCATCGACCAGACCTCCCGTTCACATCCCCACCGATCCCAACTTCTCAGTTGCTTCCTTCCTCTTCAAAAGCACTTGCTCTTTTGCTAACACTCCCGCTCTCATCGATGCTGATTCTGGAGAATCTCTCACCTTCCACCACCTCAAAATCTACGTCTCCAGGCTCGCTCACGCCTTGTTACATCTCGGCATCAGCAAAGGCGACGTCGTTCTGATATTCGCTCCCAATTCCATACATTTCCTAGTATGCTTCCTCGCCGTTGTTGCTATCGGCGCCATCGTCACCACCTGCAATCCTTTATACACCGTCTTCGAGCTTTCAAAACAAGTCAAAGATTCTAATCCGAAAATCGTAGTCACCGTTGCCGAACTTTTCGACAAGATTGAAGCGTCAAATTTACCATCCATAATTTTGAATCCTTCAGACACTGTAAAATTATCGAACACCTCAAGTTGTAAGATTTGGTATTACGCTGATTTGATCAGAATGTCAAACTCAAGCTCCAATTTACCGCCGAACAATGTCACGCAGTCCGACGTGGCGGCGCTTTTGTACTCATCAGGCACGACGGGGAGAAGCAAGGGAGTGATTCTAACCCATCGAAATTTCATTTCGGCATCATTAATGGCGACGGCAGATCAGGACAGATACGGCGAAATGAACAATGTGTTCCTCTGTTTTTTGCCGATGTACCATGTGTTTGGGCTTTCGATTATAACATATTCGCAGCTGCGGAGGGGGAACACGGTGGTGTCAATGAGCAGGTTTGATTTGGAGAAGGCTCTGGAGGCAGTGGAGAAGTTCAAGGTGACGTACTTGTATGTTGTTCCGCCGGTTATGATTGAGCTGGTGAAGCGGAGTGATGTACTGAACAAGTATGACTTATCATCACTGAAGCAGATCGCAGGAGGTGCGGCACCTCTTGGGAGAGATGTAATGCAGGAGTGTGCTAAGACTCTTCCCCGGATTGAGATTATTCAGGGATATGGCATGACAGAGGCATGTGGAATTATTTCCTTAGAGAATGCGAAGGAAGGATGCCGCCTTTCAGGTTCAACCGGAACACTACTTCCAGGCTTCGAATCCCGAATAGTTAGTTTGGATACGTCCAAGCCCCTTCCACCCAATCAATTAGGGGAAATTTTCCTTCGAGGACCTACTATGATGCAAGGATATTTTAACAATCCAGAAGCGACAAAGCTGACCATAGATGATCAACGTTGGGTACATACAGGAGACCTTGGTTATTTTGATGAAGAGGGACAGCTATTTGTAGTAGATCGAATTAAGGAGCTCATCAAGTGTAATGGGTATCAGGTGGCACCAGCAGAACTTGAAGACTTGTTGATTTCTCACCCTGAAATATTGGATGCTTGTGTGATTCCATCCACTGATGCTAAAGCTGGTGAGGTTCCAGTTGCTTACGTAGTTCGCTCACCCAACAGCTTGGTAACGGAACAAGACATTCGGAAGTTCGTAGCAGAACAGGTTGCACCATACAAAAGACTAAGGCGAGTGACTTTTATAGACAAGGTTCCGAAGTCATTGACGGGGAAGATCTTAAGAAAAGATCTCATGAAAATTGACCGACAAAGGACATCAAGATTATAG 1647 0.4584 MAKCFDPKTLTYSSTRPPVHIPTDPNFSVASFLFKSTCSFANTPALIDADSGESLTFHHLKIYVSRLAHALLHLGISKGDVVLIFAPNSIHFLVCFLAVVAIGAIVTTCNPLYTVFELSKQVKDSNPKIVVTVAELFDKIEASNLPSIILNPSDTVKLSNTSSCKIWYYADLIRMSNSSSNLPPNNVTQSDVAALLYSSGTTGRSKGVILTHRNFISASLMATADQDRYGEMNNVFLCFLPMYHVFGLSIITYSQLRRGNTVVSMSRFDLEKALEAVEKFKVTYLYVVPPVMIELVKRSDVLNKYDLSSLKQIAGGAAPLGRDVMQECAKTLPRIEIIQGYGMTEACGIISLENAKEGCRLSGSTGTLLPGFESRIVSLDTSKPLPPNQLGEIFLRGPTMMQGYFNNPEATKLTIDDQRWVHTGDLGYFDEEGQLFVVDRIKELIKCNGYQVAPAELEDLLISHPEILDACVIPSTDAKAGEVPVAYVVRSPNSLVTEQDIRKFVAEQVAPYKRLRRVTFIDKVPKSLTGKILRKDLMKIDRQRTSRL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0987 548 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Glsi11g0987 548 FunFam 4-coumarate--CoA ligase 2 443 543 - -
Glsi11g0987 548 CDD 4CL 21 537 - -
Glsi11g0987 548 Gene3D - 10 442 IPR042099 -
Glsi11g0987 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 442 - -
Glsi11g0987 548 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Glsi11g0987 548 Pfam AMP-binding enzyme 40 447 IPR000873 -
Glsi11g0987 548 SUPERFAMILY Acetyl-CoA synthetase-like 24 543 - -
Glsi11g0987 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 538 - -
Glsi11g0987 548 Gene3D - 443 546 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0987 Glsi-ChrGlsi11 6230578 6234541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0987 12 544 Monolignol Biosynthesis Gene Families AT4G05160 61.163 0.0 685