Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0969 ATGAAATGACTGGCCATTTGGACCAGAGTCCAGTCATTTGAAATGAAGTGTTTTTCATTCCACTACGGAGAGAAGAAGGATGAACCAAAGAGCATGAAGTCAATTTCGGGTCGGTCCAACAGTTCCACATACGTTGAGGGTGATGTGAGAAGATCTGGTTCTGAATTAAATTCTCAGGATGTTTCAGACAACAGCACAGACTCCCTTAGGAGAACTGCATTTCCCAGTTTGTCTCAAAGACCGAGCAACCTGAGAGAGTTTACAGTATCTGAACTGAAATCAGCCACTAAAAATTTCAGTCGCTCTGCTATGGTTGGAGAGGGTGGCTTCGGCTGTGTCTACAGGGGATTGATCAAGAGTTTAGAGGACCCTTCCAGAAAAATTCATGTAGCAGTTAAACAACTTGGTAGAAGAGGAACGCAGGGGCATAGGGAATGGGTAACAGAAGTGAATGTTCTAGGCATTGTTGAGCATCCTAACCTTGTGAAACTAGTTGGCTACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACATCATTTATCCCCCCGATCAGAGACCCCTCTCCCATGGAGTAGGAGATTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAAACATCAAATATCCTTCTGGACGAGCAGTGGAATGCAAAGCTATCGGACTTTGGATTAGCAAGGTTGGGCCCATCCGAAGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCAGCTCCTGAATATATCCAAACTGGACGTCTAACATCAAAAAGTGATGTATGGAGCTATGGCGTCTTCCTTTATGAACTCATCACTGGCAGGCGCCCTTTGGATCGAAATCGGCCCAAGGGTGAGCAGAAGCTCTTGGAATGGGTAAGGCCATACCTATCAGATGGGAAGAAATTTCTACTAATACTGGATCCAAGGCTCGACAGGAAACACTTCTTCAAGTCAGCGCAGAGACTTGCTATTATTGCTAACCGATGCTTGGTCAAAAACCCAAAGAATCGCCCAAAGATGAGCGAGGTATTGTTAATGGTAAATCGGATAGTAGAATCTTCGACAGGTGCAAGTCCACAACTACCCTTGAAGAGTTTGGCATCAGCTGAAGTTTCGCAGCGCACTGAATTAAAGAACAAGAGAAGGATTGTGGATCTAAAACCTGGAGAAAGTAATTGCTTTGTTAGGTTGTGGAGGCCAAAGCTTTTAAGAGCATGTTGA 1320 0.4417 MKXLAIWTRVQSFEMKCFSFHYGEKKDEPKSMKSISGRSNSSTYVEGDVRRSGSELNSQDVSDNSTDSLRRTAFPSLSQRPSNLREFTVSELKSATKNFSRSAMVGEGGFGCVYRGLIKSLEDPSRKIHVAVKQLGRRGTQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKTSNILLDEQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPLDRNRPKGEQKLLEWVRPYLSDGKKFLLILDPRLDRKHFFKSAQRLAIIANRCLVKNPKNRPKMSEVLLMVNRIVESSTGASPQLPLKSLASAEVSQRTELKNKRRIVDLKPGESNCFVRLWRPKLLRAC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0969 439 CDD STKc_IRAK 105 383 - -
Glsi11g0969 439 MobiDBLite consensus disorder prediction 34 75 - -
Glsi11g0969 439 ProSiteProfiles Protein kinase domain profile. 99 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0969 439 PANTHER OS01G0588500 PROTEIN-RELATED 59 381 - -
Glsi11g0969 439 Pfam Protein tyrosine and serine/threonine kinase 103 377 IPR001245 GO:0004672|GO:0006468
Glsi11g0969 439 Gene3D Phosphorylase Kinase; domain 1 79 184 - -
Glsi11g0969 439 FunFam Serine/threonine-protein kinase PCRK2 185 393 - -
Glsi11g0969 439 Gene3D Transferase(Phosphotransferase) domain 1 185 394 - -
Glsi11g0969 439 MobiDBLite consensus disorder prediction 28 75 - -
Glsi11g0969 439 FunFam Serine/threonine-protein kinase BIK1 66 184 - -
Glsi11g0969 439 ProSitePatterns Protein kinases ATP-binding region signature. 105 133 IPR017441 GO:0005524
Glsi11g0969 439 SUPERFAMILY Protein kinase-like (PK-like) 75 379 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0969 Glsi-ChrGlsi11 6081491 6086290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0969 15 390 Glycoside Hydrolase AT3G07070 41.085 2.45e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi11g0969 PK_Tyr_Ser-Thr 1.1e-46 CL0016