Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0968 ATGGAAATGAATGGAATGAAGAATAATGCCTCCTGGACTGCTCTTGCTGTATTGTTCTCTTTAGTTTCTTTAAGTCTGCTACCACGGATTCAATGTGACGATGATATATCTGGTGGTAACCCTACTGTGCTCCCAATAGTAACGCAAAAAATCTACGAACGACTTACAAATGTTACTACAGTATTAACCAGGGATATCAAGGAAAATTTGGCCTTCTGCATAAAGGATGTGAATAAAGATTGGGATGGAGCCTTTAATTTTTCGGGAAAATTGGATTTCTTGACTAATTGCATTAAACAGATAAAAGGAGACCTCACATACCGAATATGCAGCACAGCTGAAATAAGGCTCTACTTCAGTATTTTCAAGGAAAAGGCGACAGCTCCTAGTTACCTAAAACCTAACAAGAATTGCAATTTGACCTCGTGGGTTTCTGGCTGTGAACCTGGCTGGGGTTGTAGTGTAGGCTCAAATGTTGACGCCAAGTATTTAAAGGAGTCAAGGGAGATTCCTTATAGAACCAAGGACTGTCAACCTTGTTGTGAAGGGTTTTTCTGCCCTCAGGGATTGACTTGCATGATACCCTGCCCACTTGGTTCTTATTGTCCACTTGGAAAACTGAACAAAACCTCCGGATTATGTGACCCATATAGCTACCACGTACCTCCTGGACAAACAAACCATTCTTGTGGTAGCGCTGATATTTGGACTGGCGTTGTCAACAATAGTGATATCTTCTGTTCTCCAGGATCATACTGCCCAACCACGATAAGTAAAGTTTCTTGCAGTAGTGGACATTACTGCTGGATGGGTTCCACGCTTCAAAAGCCATGCTTCCGGTTGAGTTCGTGTAATCCAAACACAGCAAACCAAAATATGCATGCTTATGGGGCTTTGCTTCTTGTTGCATTGAGTGCTCTCCTGCTCGTCATTTATAACTGTTATGATCAAGTTCTCTCTACTCGAGAAAGAAGGCAGGCTATTAAAAGGGAAGCCGCTGCAAGACACGCAAGAGAAACTGCACAAGCTCGCGAAAGGTGGAAAGTAGCAAAAGATGGCGCTAAGAAGCGAGTAGGGGGATTGCAAGAGCAGTTCTCCCGCACCTTTTCTCGCAGGAAATCTACTAAACAGACAGATCGATTGAAGATTTTTAGTCAATCTAAAACTGGTACAAGTGACGCTCAATTGCCACCAATGCCTCCAGATTCTTCAAATGCATCTGAGGCGTCATCTGCAGCTTCAAAAGCAAAGAAAAAGGAACCTAGCAACCTTTCTAAAATGATGGATTCCCTTGAAAATGACCCAAATAGCCATGAAGGATTTAAGCTGAAGATTGGAGATAAAAATATTAAAAAGCACGCGCCAAAGGACAAACAGTTACATACTAAGAGCCAGATTTTCAAGTATGCTTATGGTCAGATTGAGAAGGAGAAAGCTATGCAAGAGACAAACAACAACTTGAGTTTCTCGGGAGTAATTTCAATGGCTACTGAAAACGACATCAGGAAAAGGCCTCCAATTGAGGTAGCTTTCAAAGATATAACTCTCACTTTGAAAGGGAAAAACAAACATCTACTGAGATGCGTGACAGGAAAATTCAGTCCCGGTCGAGTTTCCGCTGTCATGGGTCCCTCAGGAGCCGGGAAAACCACATTTCTTTCTGCTTTGGCCGGAAAGGCAAGAGGTTGCACCGTCACAGGCTCAATTTTAATCAACGGAAAACCTGAATCCATACACTCTTATAAGAAAATTATTGGTTTTGTGCCACAAGATGATATTGTGCACGGGAACTTGACTGTGGAGGAGAATCTTCGTTTCAGTGCAAGATGCAGACTGTCTGCGGACTTGCCAAAACCAGATAAGGTTTTGATTATTGAAAGAGTAATTGAGTCCTTGGGCCTTCAGGCAGTGAGGGATTCTCTGGTTGGGACGGTAGAGAAGCGAGGTATTTCTGGAGGCCAAAAGAAACGTGTAAACGTAGGGCTAGAGATGGTGATGGAGCCTTCTTTATTAATCTTAGATGAACCCACCACTGGTTTAGACAGTGCATCTTCTAGTTTACTTCTCAAAGCTCTTCGACGTGAAGCTCTCGAAGGGGTTAACATTGCTATGGTACTTCACCAACCAAGCTATACTTTGTTCCGAATGTTCGATGATATTGTATTTCTAGCCAAAGGTGGTTTTACTGCATATCATGGTCCTGTTAAAAATGTTGAAGAATACTTTGCGAGCATTGGAATTCCTGTACCAGATCGTGTGAATCCTCCAGACCATTTCATTGACATTCTGGAAGGTTTAGTAAAACCAAGTTCAGGTGTGACTCATCAACAACTCCCTGTCAGATGGATGCTTCATAATGGTTATGCAGTGCCACCAGATTTGCTTCATTTTGCTGATGAAATTGCTCAATCTTCAACTGCTTCGAGTTCAAGTGATGCAAAGATGGGTACTAATGAAGCTACTGATCAATCCTTTGCTGGAGAGTTGTGGCAGGACGTGAAGAGTAATGTTCAGATACAACGGGATAATATTGAGGCAAGATTCTTAAATGCTAAGGATTTATCTAACCGAGTAACTCCTGGTGTTGCCCGGCAATATAGATACTATGTTGGGAGGGTTGGTAAGCAGCAGCTACGAGAAGCCAAATTGCAAGTAGTGGACTATCTCGTTTTATTAGTTGCTGGCGCTATGTTTGGAACTCTAACTAAAGCTAATGATGAAACATTCGGGTCCAAAGGCTATACTTTTACTGTTATTGCTGTCTCTCTGCTATGCAAGATTTCAGCTCTCAGATCATTTACTATGGATAAATTACAATACTGGAGGGAGAGTGCAGCTGGGATCAGCAATCTGGCTCATTTTCTCTCCAAGGACACAGTTAATCTTTTCAATACAATCATCAAACCTGTGGTATATCTGTCCATGTTCTACTTTTTCAGCAATCCAAGGTCAAGCTTTGCAAGTCATTACGCAGTTTTGGTTTGTCTTGTGTACTGTGTGACTGGCATGGCTTATATAATGGCTATTTACTTCGAGCCTGGTCCTGCACAGCTGTGGTCAGCGCTTCTTCCTGTGGTTTTGTCTCTCATTGCAAACCAGCCAAGGGATTCTACATTAATGAAGATCGTAGTACAACTGTGCTACCCGAAATGGGCTCTAGAGGCTTTTCTCATTGCAAACGCCGAAAGGTACTCTGGGGTTTGGTTGATAACTCGCTGTGGTTCGTTGATGAGTAATGGCTACGACGTCAACGATTGGTCTCTTTGTCTCCTTGTCCTCGTTTTGAACGGTATAGTTGCCCGAATTGTGGCTTTCTTTTGTCTGATGATAACTCAAAAGAAATGA 3345 0.4242 MEMNGMKNNASWTALAVLFSLVSLSLLPRIQCDDDISGGNPTVLPIVTQKIYERLTNVTTVLTRDIKENLAFCIKDVNKDWDGAFNFSGKLDFLTNCIKQIKGDLTYRICSTAEIRLYFSIFKEKATAPSYLKPNKNCNLTSWVSGCEPGWGCSVGSNVDAKYLKESREIPYRTKDCQPCCEGFFCPQGLTCMIPCPLGSYCPLGKLNKTSGLCDPYSYHVPPGQTNHSCGSADIWTGVVNNSDIFCSPGSYCPTTISKVSCSSGHYCWMGSTLQKPCFRLSSCNPNTANQNMHAYGALLLVALSALLLVIYNCYDQVLSTRERRQAIKREAAARHARETAQARERWKVAKDGAKKRVGGLQEQFSRTFSRRKSTKQTDRLKIFSQSKTGTSDAQLPPMPPDSSNASEASSAASKAKKKEPSNLSKMMDSLENDPNSHEGFKLKIGDKNIKKHAPKDKQLHTKSQIFKYAYGQIEKEKAMQETNNNLSFSGVISMATENDIRKRPPIEVAFKDITLTLKGKNKHLLRCVTGKFSPGRVSAVMGPSGAGKTTFLSALAGKARGCTVTGSILINGKPESIHSYKKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKPDKVLIIERVIESLGLQAVRDSLVGTVEKRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNIAMVLHQPSYTLFRMFDDIVFLAKGGFTAYHGPVKNVEEYFASIGIPVPDRVNPPDHFIDILEGLVKPSSGVTHQQLPVRWMLHNGYAVPPDLLHFADEIAQSSTASSSSDAKMGTNEATDQSFAGELWQDVKSNVQIQRDNIEARFLNAKDLSNRVTPGVARQYRYYVGRVGKQQLREAKLQVVDYLVLLVAGAMFGTLTKANDETFGSKGYTFTVIAVSLLCKISALRSFTMDKLQYWRESAAGISNLAHFLSKDTVNLFNTIIKPVVYLSMFYFFSNPRSSFASHYAVLVCLVYCVTGMAYIMAIYFEPGPAQLWSALLPVVLSLIANQPRDSTLMKIVVQLCYPKWALEAFLIANAERYSGVWLITRCGSLMSNGYDVNDWSLCLLVLVLNGIVARIVAFFCLMITQKK 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0968 1114 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 454 1102 - -
Glsi11g0968 1114 SMART AAA_5 535 727 IPR003593 GO:0016887
Glsi11g0968 1114 ProSitePatterns ABC transporters family signature. 650 664 IPR017871 GO:0005524|GO:0016887
Glsi11g0968 1114 FunFam ABC transporter G family member 24 503 745 - -
Glsi11g0968 1114 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 509 750 IPR003439 GO:0005524
Glsi11g0968 1114 Pfam ABC-2 type transporter 707 1114 IPR043926 GO:0140359
Glsi11g0968 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 732 IPR027417 -
Glsi11g0968 1114 CDD ABCG_EPDR 506 733 - -
Glsi11g0968 1114 Gene3D - 497 745 IPR027417 -
Glsi11g0968 1114 MobiDBLite consensus disorder prediction 337 442 - -
Glsi11g0968 1114 Pfam ABC transporter 529 677 IPR003439 GO:0005524
Glsi11g0968 1114 MobiDBLite consensus disorder prediction 337 358 - -
Glsi11g0968 1114 MobiDBLite consensus disorder prediction 380 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0968 Glsi-ChrGlsi11 6075084 6081400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0968 536 726 Calmodulin-binding Proteins AT2G36910 29.146 1.88e-09 60.1