Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0945 ATGATGGGTGGAGGCAGGCCAGCAAAGCCAGGTGTAGGACAAAGTGGGTTACCTCACCCCAAGGACTACCACGACCCACCACCCGCACCCCTCTTCGACATCCACGAGCTCCGACAGTGGTCCTTTTACAGGGCTCTTGTTGCCGAGTTCGTCGCCACGCTCTTGTTCTTGTACATTACCGTCTTGACTGTCATTGGTTACAAGAGCCAGATCGACGCTGGAGGGCCTTGCGACGGCGTTGGCATTCTCGGCATAGCTTGGGCCTTCGGTGGCACGATTTTCGTCCTCGTCCACTGCACCGCCGGTATTTCTGGAGGACACATAAACCCGGCGGTGACGTTTGGAATGTTCCTGGCGAGGAAGGTGTCGCTGTTGAGGGCTATATTGTACATGGTGGCTCAGTGCTGGGGGGCCATATGCGGATGTTGGCTGGTGAAGGCTTTCCAAAAGGTCTACTACAACAGGTACGGTGGGGGTGCCAACCAACTGTCTGCTGGGTACGCCAAAGGCACTGGTTTGGGGGCTGAGATTATTGGTACCTTCGTTCTTGTTTACACCGTCTTCTCTGCTACAGATCCCAAGAAAAAGGCCAGAGATTCTTATGTTCCCGTGTTGTCACCACTTCCAACTGGATTTGCGGTGTTCGTGGTTCATTTGGCCACCATCCCAATCACCGGCACTGGCATCAACCCTGCTCGGAGCCTTGGGCCTGCAGTTATGTACGACAACCAAAAGGCATGGGATGACCAGTGGATCTTCTGGGTGGGACCGTTCGTTGGTGCTGCTATTGCTGCTATCTATCACCTGTACTTGTTGAGAGCTCAAGATGCCAAAGCACTAGTATCTTTCAAGAGCACTTCAACCCTTTAA 870 0.5368 MMGGGRPAKPGVGQSGLPHPKDYHDPPPAPLFDIHELRQWSFYRALVAEFVATLLFLYITVLTVIGYKSQIDAGGPCDGVGILGIAWAFGGTIFVLVHCTAGISGGHINPAVTFGMFLARKVSLLRAILYMVAQCWGAICGCWLVKAFQKVYYNRYGGGANQLSAGYAKGTGLGAEIIGTFVLVYTVFSATDPKKKARDSYVPVLSPLPTGFAVFVVHLATIPITGTGINPARSLGPAVMYDNQKAWDDQWIFWVGPFVGAAIAAIYHLYLLRAQDAKALVSFKSTSTL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0945 289 CDD MIP 44 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Glsi11g0945 289 SUPERFAMILY Aquaporin-like 35 273 IPR023271 -
Glsi11g0945 289 MobiDBLite consensus disorder prediction 1 20 - -
Glsi11g0945 289 Pfam Major intrinsic protein 36 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 FunFam Probable aquaporin PIP1-2 29 287 - -
Glsi11g0945 289 NCBIfam MIP family channel protein 48 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 Gene3D Glycerol uptake facilitator protein. 29 289 IPR023271 -
Glsi11g0945 289 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g0945 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 19 276 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0945 Glsi-ChrGlsi11 5912942 5914362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0945 12 285 Major Intrinsic Protein MIP AT5G60660 75.812 1.62e-154 431