Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0941 ATGCAAATCCATCATAGCTTTCGGGGGATTTTTCAATCTTCTGTCGTTCTCCAGCTTCTGCTGATCCTGTGCTCCACTGGCGCATTTGGGTTTGGGATGATGGGACCAATATCAGCTTCATCTGGCAAAGATGAATTCTTCTGCGCCATCGATGCAAGTGGGAAGCAGGGTATCATTTGCTGGGGGAAGAATAGCTCTTCAACAGTTCCATCGTCTTCTTCAGCTTCAGCCTATCTTAGTAATATTCCTGCTATGGCAACCCTGTCTGGTGGCGAAGGGTTTATGTGTGGCATTCTAGCAAATAATTCGCAAGCCTATTGCTGGAGCGCCACCAGGCCAGCTATAGATCTCGTGCCTCCCACATACCAAAGCACTGCCTACTCTTATATTGCTGCGGGCAAGAATCATGTTTGTGCCATTAGAGGATCCTATTATGCCGATGACGGCTCAGGAATAGTTGATTGTTGGGAAATTCTGAAAACCGTGAACAAGAGTTTAACATCCAAAGACAGCGATTTATATTATGATCAGTCCACTAGCAGTCTCGCATTAAACAAAATTGTATCTGGTGAGGGATTCACTTGTGGTGCGGTCAGAGAAGGAGGACTTGTTTGTTGGGGACCTACTTCCGCGAGCTTAGGGATTTCGAATGTATCGGAAAACTTCGCAGTTTTAGCTTCGGGAAGGAGTTCAATTTGTGGGCTTTCGAACGTTTCCGGCGATTTAAAATGTTGGGGCGATGCAGAATCATTTGTTGATCCACCTCTTGAGGTTGAATTAATCTCTTTGTCTGTTGGAACTCACCATTTTTGTGGTATTCGAGCTGACAATCATATAGTGGAGTGTTGGGGAAGTTTCAATTCGTCTGTGGTTCCAAAAGTTTCTGGATTTATGGCAATTGCTTCTTCAGATTATACAACTTGTGGCATCAGGGAAGATGATCTTTTACTGGATTGCTGGGTAGTCAATGCGTCCAAGCCCAATTTTGATCCTCCCTTGGAACTGTCTAGTCCGGGTCTTTGCAGTGCCAATTCTTGTAGAAAAGGACAGTTTGCTTTTAATGCTAGTATTCTGAATGTGCCTGCTTTGACAAGCCTCTGCTTTCGAAAAGATTTGAGGATTTGTTCACCCTGTGGGTCAAATTGTTCTCAAGGTTCCTTCTTGTCTACTCCATGTACTGAGAATGCTGATAGAGTATGCACTGCTTGTTCTCTTTGCCAGAACAGCTCTTGTTGGGATATATGTCGTCTTCAATCATCTGCAGAGATGCATCGGAAGCGTTGGCATAATTTGCGTAGATTATTGGTCATAATTGGGTCCTCTGCTTTGGGTTTCTTGTTAATATTAACTTGCGGGTGTCTTTTCCCACGTGTAGTTGCCACCCGAAAAGCACAGGGGACTAAGAAACAATCCAAATCTTGCATAGGCAGAGCAGAGCAGCAAGGTGACATGATTGTTGATCTTCACTCTTCTCCTTCTACGGCCTCCTGTCCTGGGACGCCTCAAGTTTTCCGACTTTCAGAACTTAAGGATGCCACCAATGGGTTCAAGGAATTTAATGAGCTTGGTAGGGGAAGTTATGGTTTTGTTTACAAAGCTTTATTAGCCGATGGTCGGGTAGTTGCTGTGAAGAGGGCGAATGCTGCCACAATAATTCACACTAATAATCGTGACTTTGAAATGGAGCTGGAAATCCTCAGCAAAATCCGCCACCGTAATATTGTGAACTTGTTGGGTTACTGTGCAGAGATGGGAGAGAGATTGCTTGTTTATGAGTATATGCCCCACGGAACACTTTATGACCACCTCCACGGTGGCCTTTCTCCTCTGAATTGGAGCCTCAGGTTAAAGATCTCAACGCAGGCTGCAAAGGGCCTTGAATACCTTCACAAGGAACTAGTGCCACCAGTTGTCCATAAGGATCTCAAGAGTTCAAACATTCTTTTGGATTCAGAGTGGGGAGCAAGAATTGCAGACTTTGGACTCCTCACCACAAGGGTCAAAGATCTTAATGGGGACCCGGAAAGCGATGTTTACAACTTGGGGATTGTATTACTAGAAATTCTAAGCGGAAGGAAAGCTTATGACACAGAGTTCACGCCTGCAAACATAGTTGAGTGGGCAGTGCCTTTAATCAAACAGGGGAAGGCAGCTGCCGTAATTGATCGGCATGTGGCTCTTCCAAGGAATGTTGAACCTTTGCTCAAGCTAGCGGATATAGCAGAGCTCGCAGTGCGAGGGAATCCAAGCGAGCGTCCAAATATGTCAGATATAGCTACTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAG 2319 0.4502 MQIHHSFRGIFQSSVVLQLLLILCSTGAFGFGMMGPISASSGKDEFFCAIDASGKQGIICWGKNSSSTVPSSSSASAYLSNIPAMATLSGGEGFMCGILANNSQAYCWSATRPAIDLVPPTYQSTAYSYIAAGKNHVCAIRGSYYADDGSGIVDCWEILKTVNKSLTSKDSDLYYDQSTSSLALNKIVSGEGFTCGAVREGGLVCWGPTSASLGISNVSENFAVLASGRSSICGLSNVSGDLKCWGDAESFVDPPLEVELISLSVGTHHFCGIRADNHIVECWGSFNSSVVPKVSGFMAIASSDYTTCGIREDDLLLDCWVVNASKPNFDPPLELSSPGLCSANSCRKGQFAFNASILNVPALTSLCFRKDLRICSPCGSNCSQGSFLSTPCTENADRVCTACSLCQNSSCWDICRLQSSAEMHRKRWHNLRRLLVIIGSSALGFLLILTCGCLFPRVVATRKAQGTKKQSKSCIGRAEQQGDMIVDLHSSPSTASCPGTPQVFRLSELKDATNGFKEFNELGRGSYGFVYKALLADGRVVAVKRANAATIIHTNNRDFEMELEILSKIRHRNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKISTQAAKGLEYLHKELVPPVVHKDLKSSNILLDSEWGARIADFGLLTTRVKDLNGDPESDVYNLGIVLLEILSGRKAYDTEFTPANIVEWAVPLIKQGKAAAVIDRHVALPRNVEPLLKLADIAELAVRGNPSERPNMSDIATWLEQIVKDGLIL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0941 772 SUPERFAMILY Protein kinase-like (PK-like) 490 763 IPR011009 -
Glsi11g0941 772 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 345 400 IPR001368 GO:0005515
Glsi11g0941 772 FunFam serine/threonine-protein kinase-like protein CCR1 485 593 - -
Glsi11g0941 772 Pfam Protein tyrosine and serine/threonine kinase 520 666 IPR001245 GO:0004672|GO:0006468
Glsi11g0941 772 SMART serkin_6 516 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0941 772 ProSiteProfiles Protein kinase domain profile. 516 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0941 772 SUPERFAMILY RCC1/BLIP-II 185 327 IPR009091 -
Glsi11g0941 772 Gene3D - 32 166 IPR009091 -
Glsi11g0941 772 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Glsi11g0941 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Glsi11g0941 772 Gene3D Phosphorylase Kinase; domain 1 484 593 - -
Glsi11g0941 772 Gene3D - 167 331 IPR009091 -
Glsi11g0941 772 FunFam Serine/threonine-protein kinase-like protein CCR1 671 769 - -
Glsi11g0941 772 SUPERFAMILY RCC1/BLIP-II 36 141 IPR009091 -
Glsi11g0941 772 Gene3D Transferase(Phosphotransferase) domain 1 669 769 - -
Glsi11g0941 772 Gene3D Transferase(Phosphotransferase) domain 1 594 668 - -
Glsi11g0941 772 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 13 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0941 Glsi-ChrGlsi11 5888913 5891231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0941 28 764 Receptor kinase-like Gene Family AT3G59420 32.503 3.86e-112 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi11g0941 Pkinase 2.8e-31 CL0016