Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0929 ATGAGCGTTATCGACATTCTAACCAGAGTTGATTCGATTTGCAAGAAGTACGACAAATACGATGTCGACAAGCACAAGGATCCTAATATCTCTGCCGACGATGCCTTTGCTCGACTCTACGCCGTCGTCGACGCCGACATCGAGGCTGCTCTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAGTAGGGCATCTGCCGTCGCGATCAATGCAGAGCTTCGTCGGACCAAAGCTCGATTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCGGTCAAAAAGGTTAAGGGGCTTTCATCAGCAGAATTTGCTGCCCGCAATGATTTGGTTCTTGCATTGCCGGAGAGGATTCTAGCTATCCCAGATGGGACTCCTGCTGCCCCCAAACAAACTGGAGGTTGGGCAGCTTCTGCTTCACGTACCGAAATTAAATTTGATTCAGACGGGCAATTTGACAGTGAGTACTTCCAGCAAACTGAGGAATCAAGTCAATTCAGGCAGGAGTATGAAATGCGTAGAATGAAGCAGGATCAAGGTTTGGAAGTGATCTCAGAAGGATTGGATACGTTGAAAGACATGGCACATGATATGAATGAGGAAATGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACCAATGTCAGACTTAAAGACACAGTGAATCAGCTTCGATCCAGTCGAAACTTCTGCATTGATATTGTTTTGTTGATTATAATTCTGGGAATTGCTGCCTATTTATACAATGTACTAAAGAAATGA 798 0.4549 MSVIDILTRVDSICKKYDKYDVDKHKDPNISADDAFARLYAVVDADIEAALQKAETASKEKSRASAVAINAELRRTKARLLEEVPKLQRLAVKKVKGLSSAEFAARNDLVLALPERILAIPDGTPAAPKQTGGWAASASRTEIKFDSDGQFDSEYFQQTEESSQFRQEYEMRRMKQDQGLEVISEGLDTLKDMAHDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0929 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Glsi11g0929 265 Pfam SNARE domain 207 256 IPR000727 -
Glsi11g0929 265 PANTHER SYNTAXIN 45 252 IPR045242 -
Glsi11g0929 265 Coils Coil 70 90 - -
Glsi11g0929 265 CDD SNARE_Qc 175 230 - -
Glsi11g0929 265 SUPERFAMILY SNARE fusion complex 163 230 - -
Glsi11g0929 265 FunFam Putative syntaxin-71-like 170 231 - -
Glsi11g0929 265 Gene3D - 170 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0929 Glsi-ChrGlsi11 5833121 5836272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0929 1 264 SNARE and Associated Proteins AT3G09740 77.068 2.77e-153 426