Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0926 ATGCAATTAGGGCCGAGTATAGCACGAAACGTTTGTTTCTTCTCCACTCACTTGTTTATGGATTGTTGCTTGTACTTGCTAATCTTGAGTCTATATTATCCGAGTTTCGATCTCCGATATTTGCAATTTTTAACTGAAACACGGGATTCGCGCTTTCCAAGTTCCTTCTTTCACGTGCCGAGCCTCGAGAGACAGCGAAATGAAAATCGGATGCTCGTCACTGGGCCAGGGCGTTTTTTCATAAATTCGGCAATGGGTGCTGTCCCTTGTATGTGGTTGTGCAGTAGCTGTGGATGGAGTGCCAAGGGAGTTTTTGTCGATCGTGCTGATGGTTACTGTTTAGTAGTATTACGGTTGATATCGCTTGGTAAAGTTAATCTAACAGATAAAATCACAATTCAGGAGCAAGGCGTTGGAAGAGCAAATGGCTTGATTTCTAAGGTGAGAGAAGGAGGAAGTAAGAGCGACTTGCACCGTTTTAGAGACTCAATTGAAGGTAGAGGGATAGGGCAGGAAGAAGAGGACAAGCATGCAGACTGGAAGCTTTCGTATTCTCCCAATGGTAATCACGCACACATGGCCACCACTACCAACAAGCCTCCCTCTAACTTCACCTTCCTCCTCCTTTTACTTCTGTTACATTTCACTTTGGGTAAAAGCCAACTTCAGCTGAACTACTATGCCAAGAGTTGCCCAAGAGCGGAAGAGATCATCAAACAACAAGTGACCCAGCTGTACAAGAAGCATGGGAACACTGCCGTTTCGTCGGTTAGAAATCTCTTCCATGATTGCATGGTCAAGTCATGCGATGCATCCCTGCTGTTAGTGACGGTGAGGGGGGTAGTATCGGAGCAGACGTCGCAGAGAAGCTTTGGGATGAGAAACTTTAAGTACACGAACAGCATCAAAGGCGCTATTGAGAAAGAATGCCCCTTGACAGTGTCTTGCGCTGACATTGTTGCACTTTCAGCTAGAGATGGCATTGTCATGTTGGGAGGTGCAAGCATTGAAATGAAGACTGGGAGAAGGGATAGCATGGAAAGCTATGCACCAGTGGTGGAAGACTACATCCCCAACCATAATGACTCCATATCCCTTGTGCTCTCTCGTTTTCAATCTCTTGGCATTGACCTTGAAGCCACCGTCGCTCTTTTAGGCGGTCACTCGGTAGGAAGAGTTCACTGCGTGAATATGGTGCAGAGGCTGTACCCCACGGTGGACCCATCGTTGGACCCTGCACATGCGGAGTACCTGAAACGTCGGTGCCCAACTCCAAATCCAGATCCAAAGGCAGCCTTATATGTAAGGAACGACCTTGAAACGCCCATGGTCCTGGATAATGTGTACTACAAGAACATCTTGAAACACAAAGGCCTTCTCACGGTGGATGAAGAACTGGCTACGGACCCAAGAACCGCACCTTACGTCCAAAAGATGGCTGCCGATAACGAATATTTCTCCCAGCAGTTCTCAAGGGCCATTCTGTTGTTATCAGAGATTAATCCTCTCACGGGCGATCAAGGTGAAATCAGAAAGCATTGCAGTTACGTGAACTCCCCCGTCAATGGGACTGTATAA 1578 0.4708 MQLGPSIARNVCFFSTHLFMDCCLYLLILSLYYPSFDLRYLQFLTETRDSRFPSSFFHVPSLERQRNENRMLVTGPGRFFINSAMGAVPCMWLCSSCGWSAKGVFVDRADGYCLVVLRLISLGKVNLTDKITIQEQGVGRANGLISKVREGGSKSDLHRFRDSIEGRGIGQEEEDKHADWKLSYSPNGNHAHMATTTNKPPSNFTFLLLLLLLHFTLGKSQLQLNYYAKSCPRAEEIIKQQVTQLYKKHGNTAVSSVRNLFHDCMVKSCDASLLLVTVRGVVSEQTSQRSFGMRNFKYTNSIKGAIEKECPLTVSCADIVALSARDGIVMLGGASIEMKTGRRDSMESYAPVVEDYIPNHNDSISLVLSRFQSLGIDLEATVALLGGHSVGRVHCVNMVQRLYPTVDPSLDPAHAEYLKRRCPTPNPDPKAALYVRNDLETPMVLDNVYYKNILKHKGLLTVDEELATDPRTAPYVQKMAADNEYFSQQFSRAILLLSEINPLTGDQGEIRKHCSYVNSPVNGTV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0926 525 CDD secretory_peroxidase 221 517 IPR033905 GO:0004601|GO:0042744
Glsi11g0926 525 FunFam Peroxidase 225 365 - -
Glsi11g0926 525 SUPERFAMILY Heme-dependent peroxidases 221 518 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PANTHER - 206 518 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 Gene3D - 225 518 - -
Glsi11g0926 525 PRINTS Plant peroxidase signature 379 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 313 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 231 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 452 469 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 492 505 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 255 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 332 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Plant peroxidase signature 436 451 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Haem peroxidase superfamily signature 253 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Haem peroxidase superfamily signature 332 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Haem peroxidase superfamily signature 314 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Haem peroxidase superfamily signature 438 453 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 PRINTS Haem peroxidase superfamily signature 380 395 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 FunFam Peroxidase 358 497 - -
Glsi11g0926 525 Gene3D Peroxidase, domain 2 358 497 - -
Glsi11g0926 525 ProSiteProfiles Plant heme peroxidase family profile. 221 518 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0926 525 Pfam Peroxidase 239 482 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0926 Glsi-ChrGlsi11 5805033 5812017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0926 224 518 Peroxidase AT2G37130 75.338 7.38e-165 467