Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0925 ATGTTGGTACTTTCCTTCACATTTTCGAGCCCCATCGTTATCACTTTTACATTGTTTCTCTGCTTTGTCAACTGTATCGTTACAATCTCAACCACTGATTTCGACTTTGGGACCTTAACTTTAAGCAGTTTGAAGCTTCTCGGCGATGCCCACTTGAACAATGGCAGTGTAAGGCTCACTCGTGACCTTGCTGTGCCTAATTCTGGTGCAGGGAGAGCTCTCTACTCTAAACCAGTGATATTCCGGCAACCTGGCAGTCGCCTTCCGGCGAGTTTCAAGACCTTTTTCTCATTTTCGGTCATCAATCTGAATCCTTCTTCCATTGGCGGGGGTCTCGCTTTCCTCATCACGCCAGATGATGAGACCGTCGGTGATGCAGGCGGCTTCCTTGGCCTCCTTAACGGGGAGAGCACTGCTCCCTCGAGTTTCCTGGCGGTTGAGTTCGACACACTAATGGACGTAGAGTTCAAGGACCTTAACGGAAACCATGTGGGTCTGGACCTAAATAGCATGGTTTCAACTCAAGTTGGTGACTTGGAATCCATTGGAATCGATCTTAAAAGTGGCAACCTTGTGAACGTGTGGATCGAGTACGACGGCTCAACGATGGGCTTTAGCATCTGGATTTCGTACTCAAATCTGAAGCCAAACGAGCCCCTTTTGTCGTTCAATCTTGATCTAGATCAGTACGTAAATGACTTTATGTACGTAGGTTTCTCTGGCTCTACGCAGGGAAGTACAGAGGTTCACAGCGTACAGTGGTGGAGCTTTAGCTCTTCCTTTGACTCGTATTCGTCTTCTGGGCCAGGGTCTTCGGCGGCGCCGCCACCTCCCACTGTTAGTTTGATGAACCCAACCGCCAATTCCGAGAAGTCGCCACCTCCATCATTGGCTCCTTCGGCTTCTGATTCAGGCTCAAATACTCAACAAAAGGACGGTAAATCGTCCTGCCACAATCAGCTCTGTAAGCAAGGTGCGGGCGCTGTTGCAGGGGTTGTAACGGCAGGGGCTTTCGTTCTAGCATTGTTCGCCGGCGCATTAATTTGGGTATACTCTAAAAAGGTGAAACACATTAAGAAATCTGACTCACTTGCGTCAGAAATCATCAAAATGCCAAAAGAGTTCAGCTACAGGGAGCTCAAGGCAGCCACCAAGTGCTTTAGTGCGAATAGAATAATTGGGAACGGCGCATTTGGAACGGTGTACAAGGGTATATTGCCAGAGAACGGCGACATTGTTGCGGTTAAAAGATGTAGCCACAGTGGTCAGGGGACGAATGAATTTTTATCAGAATTATCTATAATTGGAACTCTTAGACATAGAAATCTTGTCCATCTTCAAGGTTGGTGCCACGAGAAAGGTGAAATTTTATTAGTCTATGATTTAATGCCCAATGGGAGTCTAGATAAAGCTCTGTTTGAGGCCAGAATTCCTCTGTCATGGCCTCAAAGGCGTAAAATTTTGTTAGGCGTTGCCTCTGCTCTGGCCTACTTGCATCAAGAATGCGAAAATCAGGTAATTCACAGAGATATTAAGACCAGCAACATAATGTTAGACGAAGGGTTCAATGCCCGATTGGGCGACTTCGGTTTAGCGAGGCAAACTGAGCACGACAAGTCCCCAGACGCCACGGTGGCCGCCGGAACAATGGGTTACTTGGCGCCGGAGTATCTCCTTACAGGTAGAGCTACAGAGAAAACTGATGTGTTCAGTTATGGTGCGGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCCATAGAGAAAGATGCCACAGGGGTTAGTAAAGTTGGGATTAGCAGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGAGAAGGCAAGTTGCTAATGGCAGCCGATCCAAGGCTCGAGAGTGAGTTCGATGAGGATGAGATGAGGAGAGTACTGTTGGTTGGGCTAGCTTGCTCCCACCCTGACTCATCGGCTAGGCCCACGATGCGTGGTGTAGTTCAGATGCTGGTGGGAGAGGCTGAAGTCCCCATTGTTCCAAGAATCAAACCTTCCACTAGTTTTAGCACCTCCCACCTCTTAATGAGCTTGCAAGACAGTGTATCTGACTGTAATGGTTTAATCACCATCTCCACCTCCTCATCAGAGAACGGCTTTAACGGTGGAGATATAGTCTGA 2148 0.48 MLVLSFTFSSPIVITFTLFLCFVNCIVTISTTDFDFGTLTLSSLKLLGDAHLNNGSVRLTRDLAVPNSGAGRALYSKPVIFRQPGSRLPASFKTFFSFSVINLNPSSIGGGLAFLITPDDETVGDAGGFLGLLNGESTAPSSFLAVEFDTLMDVEFKDLNGNHVGLDLNSMVSTQVGDLESIGIDLKSGNLVNVWIEYDGSTMGFSIWISYSNLKPNEPLLSFNLDLDQYVNDFMYVGFSGSTQGSTEVHSVQWWSFSSSFDSYSSSGPGSSAAPPPPTVSLMNPTANSEKSPPPSLAPSASDSGSNTQQKDGKSSCHNQLCKQGAGAVAGVVTAGAFVLALFAGALIWVYSKKVKHIKKSDSLASEIIKMPKEFSYRELKAATKCFSANRIIGNGAFGTVYKGILPENGDIVAVKRCSHSGQGTNEFLSELSIIGTLRHRNLVHLQGWCHEKGEILLVYDLMPNGSLDKALFEARIPLSWPQRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKDATGVSKVGISSNLVEWVWSLHREGKLLMAADPRLESEFDEDEMRRVLLVGLACSHPDSSARPTMRGVVQMLVGEAEVPIVPRIKPSTSFSTSHLLMSLQDSVSDCNGLITISTSSSENGFNGGDIV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0925 715 MobiDBLite consensus disorder prediction 283 317 - -
Glsi11g0925 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Glsi11g0925 715 Pfam Protein kinase domain 389 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0925 715 Gene3D Phosphorylase Kinase; domain 1 349 462 - -
Glsi11g0925 715 SMART serkin_6 387 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0925 715 SUPERFAMILY Protein kinase-like (PK-like) 369 693 IPR011009 -
Glsi11g0925 715 CDD lectin_legume_LecRK_Arcelin_ConA 48 255 IPR001220 GO:0030246
Glsi11g0925 715 MobiDBLite consensus disorder prediction 267 317 - -
Glsi11g0925 715 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 263 IPR013320 -
Glsi11g0925 715 FunFam L-type lectin-domain containing receptor kinase VIII.1 351 462 - -
Glsi11g0925 715 PANTHER - 57 670 - -
Glsi11g0925 715 CDD STKc_IRAK 393 660 - -
Glsi11g0925 715 Gene3D - 30 269 - -
Glsi11g0925 715 ProSiteProfiles Protein kinase domain profile. 387 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0925 715 Pfam Legume lectin domain 33 262 IPR001220 GO:0030246
Glsi11g0925 715 Gene3D Transferase(Phosphotransferase) domain 1 463 666 - -
Glsi11g0925 715 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 271 - -
Glsi11g0925 715 ProSitePatterns Protein kinases ATP-binding region signature. 393 416 IPR017441 GO:0005524
Glsi11g0925 715 FunFam L-type lectin-domain containing receptor kinase VIII.1 463 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0925 Glsi-ChrGlsi11 5799155 5801302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0925 17 695 Receptor kinase-like Gene Family AT3G53380 70.365 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi11g0925 Pkinase 6.5e-50 CL0016