Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0924 ATGAGACGTAGGAAGGACTTAGTCTTGTCTTTCTCTCTCTCAATGGATTGTTTGCTGTGTGGATATCTAGATGAGCAGAAGCCTTCAGAAGCAATCCTATTGTCGAAAAGGGATTTAAAGGATGGCACTTCTTTGGCGATAAATCCGTGTCTCATTTCTGGAACCTTCTTCAACCCGTTTCGTTTTGGCGCAACTCCGAATTGCTTACGCTTTATCACCAGATCTGTTCGATTCAGCGTGGCAGCCATGGATGATGACTTTGAGTTTGCTGATAAAGTTCCTCCTTCTTTCGATCGCCTGGGAAATGTGATCAAGGATTCTGAAGCCAAAGGGTTCAACCCAGCATTAATAGTTCTCCTGCTTGTTGTTGGGCTGCTATTAACATTCCTCGTCGGAAATTATTTGCTTTACACGTATGCACAGAAGACCCTTCCTCCGAGAAAAAAGAAGCCAATCTCAAAGAAGAAGATGAAAAAGGAGAGGCTGAAGCAAGGCGTCTCTGCACCTGGAGAGTAG 516 0.4438 MRRRKDLVLSFSLSMDCLLCGYLDEQKPSEAILLSKRDLKDGTSLAINPCLISGTFFNPFRFGATPNCLRFITRSVRFSVAAMDDDFEFADKVPPSFDRLGNVIKDSEAKGFNPALIVLLLVVGLLLTFLVGNYLLYTYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0924 171 PANTHER DNA-BINDING PROTEIN S1FA2 83 171 IPR006779 GO:0003677|GO:0005634|GO:0006355
Glsi11g0924 171 MobiDBLite consensus disorder prediction 147 161 - -
Glsi11g0924 171 Pfam DNA binding protein S1FA 107 171 IPR006779 GO:0003677|GO:0005634|GO:0006355
Glsi11g0924 171 MobiDBLite consensus disorder prediction 146 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0924 Glsi-ChrGlsi11 5793221 5798941 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Glsi11g0924 S1FA 2.7e-38 No_clan