Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0916 ATGGTGCTATTCACAATAACCAGCTCCACAGTAACTATTAAGAAAAGGCAATGCAGGGGAGGTGAAGAAGATAATTCAGATCTGCCACTTTTTGGTTTCACTTCAGGAAACCAATTGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTACCGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGAAGAGGGAAGACCAGAAACCAAATAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAAACTCATATTTGGAAACTGATAAAATACCACCTCTTCCTCTACCAGAAGAGGTTAAATCAATTAATATTGAGACTACAAACAACCATGTTCATGTGGTTGAAGTTGCAACTACTGCGGATACTGAGGAACCCGTTCCTGCTGTTCAGACAGCACCTGTTGCAGTTCAAGCTGCTATAATTCCTGAGTTTGCAGGTAAATTTAAGACGGAAGTGGCGGCAATAAAGATTCAAACAGCTTTTCGAGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGCTGGTCAGGTTGAAATCTCTGATGGAAGGGCCAGTTGTAAAACGCCAAGCCACTAGTACCCTTCGCTCTATGCAGACTTTAGCTCGCGTGCAATCGCAGATTCGTTCTAGGAGGATCAGGATGCTAGAGGAGAATCAAGCTCTTCAGAGACAGTTATTACAGAAGCATGCGAAAGAGCTTGAGAGCATGCGGATAGGAGAGGAGTGGGATGACAGCCTGCAGTCAAAGGAACAAATTGAAGCCAAGTTACTGAACAAGTATGAGGCAGCTGTGAGAAGAGAAAGAGCACTGGCTTATGCATTCTCTCACCAGCAAAACTGGAAGAATTCGTCTAGATCTATAAACCCAGTATTCATGGATCCAACCAATCCGACATGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGGCCGGCCGTGGGAGAAAGAGGTTAACGACCAGTCATCTGTAAAAAGTTCAAGCCGCAGCATTACTGCTGGAGAAATCAGCAAATCATATGCTCGTTACCAACTCAATTCTGAAAAGCATTCTCCAACAGCCAGCCAAAATGCAGGCTCACCCAGCTTTAAAACCCACTCAACAACTCCTTCCAGGCCAGCTTCTGCAGCAGTTGCCAAGAAACTGAAGAAAGGGAGCCCCAAGCCCAGCTGGGTTACTGATGATGACTCTAAAAGCATGGTCAGTGTGCAGTCCGGGTTTCGGAGGCACTCCATTGCTGGATCATCAGTCAGAGATGACGAGAGCCTTGCAAGCTCTCCTGCAGTTCCAAGTTACATGGTGCCAACCCAGTCTGCAAAAGCCAAGTCCAAGACACAGAGCCCATTAACCGTAGAGAACGGAACCATCGAGCAAGGCTTCTCTGGGACTGCAAAGAAACGACTTTCTTTCCCATCTTCACCAGCCAGGCCAAGACGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCAGAAATCAGTGTGGATAATGGTGTGGCTGGTTGA 1530 0.4647 MVLFTITSSTVTIKKRQCRGGEEDNSDLPLFGFTSGNQLRNAKKMGRKGNWFSTVKKALSPESKKREDQKPNKSKKKWFGKQKLQTSNSYLETDKIPPLPLPEEVKSINIETTNNHVHVVEVATTADTEEPVPAVQTAPVAVQAAIIPEFAGKFKTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPVVKRQATSTLRSMQTLARVQSQIRSRRIRMLEENQALQRQLLQKHAKELESMRIGEEWDDSLQSKEQIEAKLLNKYEAAVRRERALAYAFSHQQNWKNSSRSINPVFMDPTNPTWGWSWLERWMAGRPWEKEVNDQSSVKSSSRSITAGEISKSYARYQLNSEKHSPTASQNAGSPSFKTHSTTPSRPASAAVAKKLKKGSPKPSWVTDDDSKSMVSVQSGFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSKTQSPLTVENGTIEQGFSGTAKKRLSFPSSPARPRRHSGPPKVESSFNAEISVDNGVAG 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0916 509 MobiDBLite consensus disorder prediction 436 475 - -
Glsi11g0916 509 MobiDBLite consensus disorder prediction 59 75 - -
Glsi11g0916 509 MobiDBLite consensus disorder prediction 399 418 - -
Glsi11g0916 509 SMART iq_5 155 177 IPR000048 GO:0005515
Glsi11g0916 509 Gene3D - 88 182 - -
Glsi11g0916 509 Pfam IQ calmodulin-binding motif 159 177 IPR000048 GO:0005515
Glsi11g0916 509 MobiDBLite consensus disorder prediction 353 381 - -
Glsi11g0916 509 MobiDBLite consensus disorder prediction 353 509 - -
Glsi11g0916 509 ProSiteProfiles IQ motif profile. 156 184 IPR000048 GO:0005515
Glsi11g0916 509 PANTHER IQ-DOMAIN 5-RELATED 45 492 - -
Glsi11g0916 509 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0916 Glsi-ChrGlsi11 5744065 5747957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0916 45 508 IQD Protein Family AT5G03040 52.686 6.23e-149 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2834 02 77455848 77459317 Glsi11g0916 11 5744065 5747957 CCT
Glsi11g0916 11 5744065 5747957 Glsi11g0916 11 5744065 5747957 ECH