Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0898 ATGAGAAGGGGTGTCCTGATGAGCATTGATGGCGATGACAAAGAGTTTCCAGAAATGACTTCACGTCTACGAGATGGGAAGAAAACCTTCAAAGATGAAGTTGCTGGTGAGGAACACAGTTTCCGTGAGGATGATGAGTTGAAAAGTAATGGAACAGCTGAAGAAGTTAAGGTTGAAGTTGGACAAGGAGGGACTGTGGAAGCCCCAGCTGTCCAGCCTATACCACAACAACAGCATCAAGGGGCAATTTGGGAGAGGTTTCTACATCTTAGATCCCTTAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGGCATGTTGTCACTGCACTGCTTCGCAATTGCAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCATGGAAGATTTTGGAAGATTTAACCAATCATATAGATCTCGTTTTAACTGAGGTAGCAATGCCTTGCTTGTCAGGAATTGGTCTTCTATGCAAAATTATGGGCCACAAAACACGGAAAAATATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTAAAACCTATACGGAAGAATGAGCTAAAAAACTTGTGGCAACATGTTTGGAGGAGATGTCATAGTTCAAGTGGTAGTGGAAGTGAAAGTGGCACACAAACCCAGAAATCCATAAAATCTAAGAATCTCGAGAGGTCTGATAACAACAGTGGTAGCAACGATGAATACTACAATGGAAGTGTAGGTCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGTACTCAGAGTTCCTGGACGAAGCAAGCTGTGGAAGTTGATAGTCCGAAACCAGTATCCCAGTGGGATCATATAGCTGAGTGCCCTGACAGCACTTGTGCTCAAGTTGTTCATTCAAATGCTGAAACATGTGTGAACAAGATGGTTCCTCTAGCCATGAAAGAGTGTCCTGATCAGAAGGAACAGCTTGAGATGAAAGTTGACTTGAGTAGAGATCCTGGCTTGATTCTCGATTATAGAAATGAGGGCGAAAAACAGAGTGACCCACCTGATGTAGGCTCCTCTAAATTCAATGAGCAAATTAATAGAGGACAGCTGGACCTTAGTTGTAAAAATCCATCCAGCAAGTTAAGGTACAAAGGTCCATTCCTGTCTGATGCCATTACTAGCACATCTGATTCTCAGATGCATCATGGAGAATTTGAAGCCTTCAATAGAAGACTCAAACCCTCAGATAGCGAAAATAAAGATATTAATGATAGGGAAGAATTGCCATCTCTTGAGCTTAGTTTAAAGAGGCTTAGAGAGGTTAAAGATGCAGGGATAACAATTCAGGATGAACGGAAAGTTTTAAGACGTTCAGATCTTTCGGCCTTTTCAAGGTACAATGCAGCCTCTAACTCTAAGAAGTCTCCTGCTGGATGTGTTGGAAGCAATTCTCTCCATAATAATAGCATAGAAGTTACAAGGAAAGATTCATCACGTGACATTCAATCTCATTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGGTACAAGCAATAACATTGATATGGGCTCCACGACTGATAATGCTTTTACTAAATCTGCTGTTATAAGCAAGCCAACAGTGGCACCAACAACGAAATGCTTGTACCAATCATCTGCTTTCCAGCCTACAAAGAACAACGTTATATGTACCACTCAACAAGTTGTGGTACATAGTACTGAAGATATGACAGCCTCGACTATGCTGGCACCACCTAGAGGAGTCACACATAGGGACTCTCCAACTCAGGACTTCCATGGCCTTTACAAGGTCCATAACCATATTGGTAACAACATGCAGCACCAGCTGCCGCCTGACGATGATGTGTCATCAAAGAAAATGGCTGCTGCAGTTCCGCATTGTGGGTCATCAAATGTAGTGGAAATGCTGGTTGAAGGTAATGTTGGAAATTATAGTATCAACAGAAGTGCGTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGTACTGCAGTTAATGCTGGAGGGATGAACATAGAAAGTAACAATGGAATTACTGGAAACAGTGGAAGTGGTGATGCTAGTGGGAGTGGGAGTGCTAACAGAATAGATCAAAACAAGAATTCTCAAAGAGAAGCTGCCTTAACTAAATTTCGCCAGAAGAGAAAGGAGAGGTGCTTCCGGAAGAAGGTTCGATACCAAAGCAGAAAGAAATTAGCTGAAGAACGACCTCGTTTTCGCGGGCAATTTGTTCGACAGTCCTCAAACGAAAATGCAAGTGAGGCAACAGATAGCTGA 2319 0.4235 MRRGVLMSIDGDDKEFPEMTSRLRDGKKTFKDEVAGEEHSFREDDELKSNGTAEEVKVEVGQGGTVEAPAVQPIPQQQHQGAIWERFLHLRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPCLSGIGLLCKIMGHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKNLERSDNNSGSNDEYYNGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPVSQWDHIAECPDSTCAQVVHSNAETCVNKMVPLAMKECPDQKEQLEMKVDLSRDPGLILDYRNEGEKQSDPPDVGSSKFNEQINRGQLDLSCKNPSSKLRYKGPFLSDAITSTSDSQMHHGEFEAFNRRLKPSDSENKDINDREELPSLELSLKRLREVKDAGITIQDERKVLRRSDLSAFSRYNAASNSKKSPAGCVGSNSLHNNSIEVTRKDSSRDIQSHSSGNPPNQNSNGTSNNIDMGSTTDNAFTKSAVISKPTVAPTTKCLYQSSAFQPTKNNVICTTQQVVVHSTEDMTASTMLAPPRGVTHRDSPTQDFHGLYKVHNHIGNNMQHQLPPDDDVSSKKMAAAVPHCGSSNVVEMLVEGNVGNYSINRSASGSNNGSNGQNGSSTAVNAGGMNIESNNGITGNSGSGDASGSGSANRIDQNKNSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEERPRFRGQFVRQSSNENASEATDS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0898 772 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Glsi11g0898 772 MobiDBLite consensus disorder prediction 663 720 - -
Glsi11g0898 772 MobiDBLite consensus disorder prediction 1 52 - -
Glsi11g0898 772 MobiDBLite consensus disorder prediction 506 531 - -
Glsi11g0898 772 MobiDBLite consensus disorder prediction 497 531 - -
Glsi11g0898 772 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Glsi11g0898 772 Pfam CCT motif 718 760 IPR010402 GO:0005515
Glsi11g0898 772 SUPERFAMILY CheY-like 91 217 IPR011006 -
Glsi11g0898 772 Gene3D - 92 247 - -
Glsi11g0898 772 ProSiteProfiles CCT domain profile. 718 760 IPR010402 GO:0005515
Glsi11g0898 772 FunFam Two-component response regulator-like PRR37 93 251 - -
Glsi11g0898 772 PANTHER TWO-COMPONENT RESPONSE REGULATOR 93 366 IPR045279 GO:0009736
Glsi11g0898 772 MobiDBLite consensus disorder prediction 217 286 - -
Glsi11g0898 772 MobiDBLite consensus disorder prediction 756 772 - -
Glsi11g0898 772 SMART REC_2 93 208 IPR001789 GO:0000160
Glsi11g0898 772 MobiDBLite consensus disorder prediction 217 279 - -
Glsi11g0898 772 MobiDBLite consensus disorder prediction 663 772 - -
Glsi11g0898 772 CDD psREC_PRR 95 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0898 Glsi-ChrGlsi11 5645260 5652772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0898 169 762 Response Regulator Gene Family AT5G02810 48.226 1.11e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Glsi11g0898 Response_reg 1.8e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0898 11 5645260 5652772 Glsi11g0898 11 5645260 5652772 ECH