Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0897 ATGGACTCTAACTTGTTCATTATTTGGGACCCAAAAATCAATTTACGATCACGAGTGAGACTGCTATGGAATAACCTTTTTGCTGTCTCATTTGTGATTGAGAAGATGGATGTTAAGGAAGCAGAAAGGGTGGTTGTTGCAAAACCAGTTGCTTCGAGGCCTACTTGCTCCACTTTTGGATCTTTCTCAGAGCTGCTTGCAGGTGCCATCGATGCCTCTCCCTCTCCTGTTTCAGCCATTAGACCAAAAACGGTGAGGTTCAAGGCTGGGTTTGTTTCTTCTCAGGCCATATCTGGACCTGCACTAACCAATTCTTCTCACCACATTCCAAAACCGGACTCCAAGCCTTCCCTGGTTTACAAGCCAATGGCAAAACTTGTATCAAAAGCTACGGTTTCTCTTTTGGCAAACATGAAGGGAAATTGCAGCACTAGTCATCAACATCCACAGCTGGAAAATTTCAGAACCAGTTTGAGCTCAAACATTCATCAGAGTAATACCCCACGCACTGAAACAAATAAGATAACCGAACCTTGTAAGGTGGTATCACAGGCACCGAACCTGGAGGAGGACCAGAAAACCTTACCATCCCCAAGTTATGGTGATCGACCTTCTTACGATGGGTATAATTGGAGGAAATATGGGCAGAAGCATGTTAAAGGAAGTGAGTACCCTCGGAGTTATTATAAATGCACACATCCTAATTGTCCAGTGAAAAAGAAGGTAGAAAGATCATTTGACGGGCAGATTGCAGAGATTGTTTATAAAGATGAGCATAGCCATTCAAGGCCCCAACCTCTTAAGCGCAACTCAGCAGGGACACAAGGATCAGGAATTTGTCAAAATAGCAACAACAATTCATGGAGTAATCAGCATGGTGAGAGGAATGAAGGTAGAATAGAGAACCAGAATGACAAAGGTCTACAGCTTAATGATTCTGGTGTTGGAGGAAGTCCTGAAAATTCGTGTGGTCAAAGTGGGGAGTGTGAGGAAGGAAGCAAGGGATTTGATGCAGAGGAAGATGAACCTAGAAGTAAAAGAAGGAAAAAGAATCAATCCAACGAAGCAGCAGTTCCAGAGGAAAGTGTAGAGCCTCGTGTTGTGGTACCTAGTTCTGCAGATTCTGAAATACCGGAAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGCGGTGAAGGGCAATCCATATCCCAGAAGTTACTATAGATGTACTTATATCAAGTGTAAGGTGCGGAAACATGTGGAAAGAGCAATAGACGACCCAAGAACATTTATCACCACGTATGAGGGAAAGCACAACCATGAGATGCTACTCAGGATCACTTAG 1329 0.4379 MDSNLFIIWDPKINLRSRVRLLWNNLFAVSFVIEKMDVKEAERVVVAKPVASRPTCSTFGSFSELLAGAIDASPSPVSAIRPKTVRFKAGFVSSQAISGPALTNSSHHIPKPDSKPSLVYKPMAKLVSKATVSLLANMKGNCSTSHQHPQLENFRTSLSSNIHQSNTPRTETNKITEPCKVVSQAPNLEEDQKTLPSPSYGDRPSYDGYNWRKYGQKHVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKDEHSHSRPQPLKRNSAGTQGSGICQNSNNNSWSNQHGERNEGRIENQNDKGLQLNDSGVGGSPENSCGQSGECEEGSKGFDAEEDEPRSKRRKKNQSNEAAVPEESVEPRVVVPSSADSEIPEDGFRWRKYGQKAVKGNPYPRSYYRCTYIKCKVRKHVERAIDDPRTFITTYEGKHNHEMLLRIT 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0897 442 SUPERFAMILY WRKY DNA-binding domain 204 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 MobiDBLite consensus disorder prediction 184 209 - -
Glsi11g0897 442 MobiDBLite consensus disorder prediction 255 375 - -
Glsi11g0897 442 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 150 437 IPR044810 GO:0003700
Glsi11g0897 442 SMART WRKY_cls 205 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 SMART WRKY_cls 378 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 ProSiteProfiles WRKY domain profile. 373 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 MobiDBLite consensus disorder prediction 266 293 - -
Glsi11g0897 442 FunFam WRKY transcription factor 364 438 - -
Glsi11g0897 442 SUPERFAMILY WRKY DNA-binding domain 373 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 MobiDBLite consensus disorder prediction 303 328 - -
Glsi11g0897 442 ProSiteProfiles WRKY domain profile. 207 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 Gene3D WRKY domain 363 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 Gene3D WRKY domain 193 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 FunFam WRKY transcription factor 192 265 - -
Glsi11g0897 442 Pfam WRKY DNA -binding domain 379 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 Pfam WRKY DNA -binding domain 207 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0897 442 MobiDBLite consensus disorder prediction 337 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0897 Glsi-ChrGlsi11 5639817 5645145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0897 113 439 WRKY Transcription Factor Family AT2G37260 46.910 7.09e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g0897 WRKY 1.7e-25 CL0274