Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0890 ATGGTTAGATCCTGCTGGAAACCAGCCGTGGATGGAGAAGATGGAGACGGCAGTGGGAGAGTTGACGGGCTGCTATGGTATAAGGATTTGGGGAACCATCTTTATGGGGAGTTCTCAATGGCTGTAGTTCAGGCCAATAGTTCATTGGAGGATCGAAGCCAACTCGAATCTGGAGCCTTGAGTTCCAATCATATGGGTCCTCAAGGGACGTTCATAGGTGTATATGATGGTCATGGTGGAAGCGAGGCCTCCCAGTTTGTCAGTGACAAGCTATTCTGCAATCTCAAGAGATTTGCGGCTGAACAGCAAGGCATGTCTGAGAATGTGATCAAAAGAGCCTTTTATGCAACAGAAGAGGGTTTTCTGTCTCTGGTGAAGAAGCAGTGGCAAAGTAAGCCAGAGATTGCATCCACAGGGACATGTTGTTTGGTGGGGATAATATGCAATGGCATGCTGTATATTGCAAATGCTGGAGACTCCCGGGTGGTGTTAGGAAGAATAGAGAGGGCAACAAGGGAAGTAGCAGCTATTCAATTATCTGCAGAACACAATGTTAACATAGAAACAGTGAGAGATGAACTTCGATCAAATCACCCCTTTGATTCACAAATCGTGGTTATGAAAAACCAAGTTTGGCGCGTGAAAGGCCTCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAAAGGGGAGAATTTAACACAGAGCCTCTACCGTCCAAGTTTAGATTAGCCGAACCCTTCTTCAAGCCGATTCTTAGTTGTGAGCCATCAATATCAACGCAGAAACTGCACCCTGATGATCAATTTTTGATATTTGCATCTGATGGTTTATGGGAACATCTTAGCAACAAAGAGGCTGTCAACATAGTCAGCAATAACCCACGTAATGGAATTGGGAAGAGGTTAGTGAAGGCTGCACTACGAGAAGCAGCGAAGAAGAGAGAAATGAGATTGTCAGACCTCCAAAAGATAGAACAAGGGGCGAGGAGGCACTTCCATGATGATATAACAGTAGTAGTTGTGTTTCTAAACCCCAAACTAACTGATAATACCTCTCTTTGGGGTTCTCCACTTTCAATCAGAGGAGGTTGA 1098 0.4472 MVRSCWKPAVDGEDGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRSQLESGALSSNHMGPQGTFIGVYDGHGGSEASQFVSDKLFCNLKRFAAEQQGMSENVIKRAFYATEEGFLSLVKKQWQSKPEIASTGTCCLVGIICNGMLYIANAGDSRVVLGRIERATREVAAIQLSAEHNVNIETVRDELRSNHPFDSQIVVMKNQVWRVKGLIQVSRSIGDAYLKRGEFNTEPLPSKFRLAEPFFKPILSCEPSISTQKLHPDDQFLIFASDGLWEHLSNKEAVNIVSNNPRNGIGKRLVKAALREAAKKREMRLSDLQKIEQGARRHFHDDITVVVVFLNPKLTDNTSLWGSPLSIRGG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0890 365 SMART PP2C_4 31 343 IPR001932 -
Glsi11g0890 365 CDD PP2Cc 35 345 IPR001932 -
Glsi11g0890 365 Pfam Protein phosphatase 2C 63 315 IPR001932 -
Glsi11g0890 365 PANTHER PROTEIN PHOSPHATASE 29 343 IPR015655 GO:0004722|GO:0006470
Glsi11g0890 365 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Glsi11g0890 365 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Glsi11g0890 365 FunFam Phosphatase 2C family protein 26 355 - -
Glsi11g0890 365 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Glsi11g0890 365 Gene3D - 28 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0890 Glsi-ChrGlsi11 5593303 5594843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0890 1 365 PP2C-type Phosphatase Gene Family AT3G12620 66.033 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0890 11 5593303 5594843 Glsi11g0890 11 5593303 5594843 ECH