Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0870 ATGAAGAGCCTCTGTTTTCAACCTAAGACGCCGTCCTTCTCCATGTCCCGTCATTCTTTACCTTCACCTTCTGCTTTGCGGATCAGCTTTTCTGATTCTACCATCGACCGTTGCATTGAGGAAGCTCGAGCTTTGATTCTGAAATGGAACCCAGAGACCTCCCCTTACGCCCAAGTCACCTCCCTCTTCTACCAACACAAAAACGAGGCCATGCAGTACATTGAGTGCGTAAACCACCTCCGCGATGTCATGCACTGCTTGGTCTCAGACAAACTAATTGTTGCACATGACTTAATGCAGATGGCGATGAAGAGGCTTCAAAAGGAGTTCTACCAAATCCTATCCATGAACCGGTCCTACTTAGATCCCGAATCTGTCTCCACTACATCGTCTCGAACCTCCATCTCTAGCACCTCCGACTACGATGAGAATGAGGTAGCACCAGGCAACGAATATCGAGTGGTAGCTGATTCAATCCCCGAAGTAGAACAAATTTCTTCCATTATCATGGCGGATCTCAGGTGCATAGCCGAGTGTATGATTTCATCCGGCTATGCAAAGGAATGTCTGAGTGTGTACAAAACTATCAGAAAGTCGATCATCGATGAAGGCATTTATCGTTTAAACGTAGATAAACTGAACTTGTCTCAGATTAATAAGATGGATCGGGAAGTTCTTGAGTTGAAAGTCAAGAGTTGGTTCGAGGCGCTCAAGTTTTCTGTGAAGACGCTCTTCCACGGAGAGAGAATCTTATGCGACCACGTCTTGGGCGCTTCAGACCCCATTAGAGAATCTTGTTTCAACGACATCTTCAGAGACGGCGCCACCTTCCTATTCAGCTTCCCCGAACTCGTCGCCAAATCAAAGAAATCGTCGCCGGAGAAGATGGGTCGAGTGCTCGACATGTACACTGCAATATCTGCACTGTGGCCGGAGATCGAATCCATCTTCTCGTTCGATTCCACCTCTACAATTCGAACTCAAGTCCTTTCTTCACAGGTTCGACTCAGCGAGTTTGTACGAACAATGCTTCTAGAATTCGAGTCCACGATCCAAAAGGACTCTTCGAAGTCATCGGTAGGCGACGGCGATGTCCACCCACTCACGATACAAGCAATGAGCTACCTCTCTCTTCTCGCAGATTACAGCAACTTACTCTCTGATATGGTCGCGAATTGGCCTCCACCGCCAAAGTTGTCACTGCCGGAGAAACTCCAAGACAGTTCAGATCCCGATGACTCGTCGGCGGTGCCTGCGTTCTCCGTGCGGGCAGCTCGGCTCATTGTCGTTCTTTTATGTAAGGTCGACGACAAAGCGAAGCATTACAAGGACGTTTCCTTGTGTAACCTGTTTCTATCAAATAATCTGCAGAATGTGATAGCCACAGTCCGTGCCTCCAACTTGCAGACAGTGCTGGGCGACGGGTGGGTGATGAAACACGAAGCAAAGTTGAAACAGTGTGTGACCGACTACGAGAGGATGGCATGGGGCGAAGTGTTTTCGTCCTTGCCTGAAAATCCAAAGGCGGTGATATCGCCGGCGGAGGCGAAGGTGATATTTGGGAACTTCAACGTCAATTTCGAGAAAACGTATCGGAAGCAGAGTTCATTTATCGTGAGGGATCCGATGCTCAGAGATGAAATCAAGGGATCCATAGCGAGAAAGCTACTCCCGATTTATCGCGAATTCTATAACACACACAGGATTACGGTGGGTTCATTGAGAGACATGACAAAATACGTCCGATTTACCCCCGAAGATGTTGCGAATTACGTGTCGAACTTCTTCTTAATGGGGACAAGCTCCGGTAGTGTGATGTCATCATCTTCGGTAACATCATCTCCTCACCGGCGGCATTAG 1860 0.4812 MKSLCFQPKTPSFSMSRHSLPSPSALRISFSDSTIDRCIEEARALILKWNPETSPYAQVTSLFYQHKNEAMQYIECVNHLRDVMHCLVSDKLIVAHDLMQMAMKRLQKEFYQILSMNRSYLDPESVSTTSSRTSISSTSDYDENEVAPGNEYRVVADSIPEVEQISSIIMADLRCIAECMISSGYAKECLSVYKTIRKSIIDEGIYRLNVDKLNLSQINKMDREVLELKVKSWFEALKFSVKTLFHGERILCDHVLGASDPIRESCFNDIFRDGATFLFSFPELVAKSKKSSPEKMGRVLDMYTAISALWPEIESIFSFDSTSTIRTQVLSSQVRLSEFVRTMLLEFESTIQKDSSKSSVGDGDVHPLTIQAMSYLSLLADYSNLLSDMVANWPPPPKLSLPEKLQDSSDPDDSSAVPAFSVRAARLIVVLLCKVDDKAKHYKDVSLCNLFLSNNLQNVIATVRASNLQTVLGDGWVMKHEAKLKQCVTDYERMAWGEVFSSLPENPKAVISPAEAKVIFGNFNVNFEKTYRKQSSFIVRDPMLRDEIKGSIARKLLPIYREFYNTHRITVGSLRDMTKYVRFTPEDVANYVSNFFLMGTSSGSVMSSSSVTSSPHRRH 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0870 619 Pfam Exo70 exocyst complex subunit 231 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi11g0870 619 MobiDBLite consensus disorder prediction 123 143 - -
Glsi11g0870 619 Gene3D Exocyst complex component Exo70 59 602 - -
Glsi11g0870 619 SUPERFAMILY Cullin repeat-like 67 596 IPR016159 -
Glsi11g0870 619 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 596 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0870 Glsi-ChrGlsi11 5491288 5493147 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0870 27 596 EXO70 exocyst subunit family AT3G09520 53.072 0.0 596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0870 11 5491288 5493147 Glsi11g0870 11 5491288 5493147 ECH