Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0831 ATGACGCCCAACACGACCACAATCCAAACATCGTCGAACGGAGCCTGGCAGGGCGATAATCCTTTGAGCTACGCTTTTCCGTTGTTGATAATTCAAAGCACCTTAGTCCTCTTCGTGAGCCGCTTCCTCGCCTTCCTCCTCAAACCCCTTCGTCAACCAAAAGTTGTCGCCGAGATTCTTGGTGGAATTGTATTAGGACCCTCAGTTATTGGGCGCAACGAAGACTTCATGAACCTTCTTTTCCCTTCGTGGAGTACTCCCATACTTGAATCAGTAGCAAGCATTGGCCTCCTCTTCTTTCTATTTCTGGTGGGTCTTGAGCTCGACTTACGCTGCCTTCGCCGTAGTGGGAAGCGAGCTTTCGGCATCGCCATCGCCGGACTATCCCTCCCTTTTCTCTTTGGCGTCGGAGTCACCTTCCTCTTTCAAAAAGTCATTCATTTCAACAACCACAAGGTGGGCACCATTCAGTACCTCATGTTCATGGGGGTCTCTCTCTCCATCACCGCCTTCCCTGTGCTAGCACGCATCTTAGCAGAGCTCAAGCTCTTAACAACCCAAGTGGGTGAAATCGCCATGGCGGCTGCAGCCTTCAACGACGTCGCTGCATGGATTATGCTCGCCTTGGCGGTGGCTTTAGCGGGTGGCGGACACAAAAGCCCCTTAATATCCATCTGGGTTCTCATTTCAGGCATGGCCTTTGTAGCCTTCATGTTACTTGTGGTTCGACCCATGATGAACTGGGTGGCCCGCCAGTGTTGTCGGGAACACGATGTCCTAGATGAAGCCTATATATGCGTGACCCTGGCAGGGGTAATGCTATCTGGCTTCGTGACGGATCTAATAGGGATACATTCAATATTTGGGGCGTTTGTTTTTGGGTTAACGATTCCAAAAGGGGGCGAATTTGCGTGCAGAGTGACGAAGAGGATAGAGGACTTTGTGTCGAGTTTGCTACTTCCACTGTTCTTTGCGTCAAGTGGGTTGAAAACGGATGTGTCCAAGTTGAGGAGTGTGGAGGCTTGGGCGCTTGTGTTGCTGGTAATATCGGCGGCGAGCGCAGGGAAGATATTGGGGACGTTCGTGGTGGCCGTGATGTGTATGATGCCAGTGAGGGAATCTCTGGCACTCGGAGTGTTGATGAACACCAAAGGGTTGGTAGAGCTTATTGTTCTTAACATCGGCAAAGAAAAAAAGGTGCTTAACGACGAGATGTTTACGATCCTGGTGCTCATGGCTCTCTTCACAACCTTCATGACAACCCCAATCGTCATGGCCATATATAAACCCTCGCGCCCTGTTTCTTCTCAAATCCGCCACCGCCGAATCCCACGGCAGCTGCCACCTCTCTCAGACTTGCAAGAGGAGCTTCGCATTCTGGCTTGCATCCACGGACCGGGTGACGTGCCCTCACTCATCAATTTCATTGAATCGATCCGAGGCTCCAACAACTCCCGTCTCAAACTCTACGTGACGCAACTTGTTGAACTCTCCGATCGCTCATCCTCCATCTTGATGGTTCAACGCTACCGGAAAAATGGGTTTCCCCTCATTAACCGATTCCGAAGAGGACGAATGCATGACCCGATTGCAAGTGCATTTGAGGCATATGGCAAAATAGGTCCGGTTACCGTACATCATTTGACAGCCATCTCGGCATTGTCGACAATGCACGAGGACGTTTGTCACATTGCACAAGTGAAGAGGGCGGCGATGATTATATTGCCCTTCCACATGCGCTGGAGAGGGGAAGATGAAGAGGCAATAGAAAACATAGGGCAGGGATGGAGAGAAGTCAATCACAGGGTGCTTCAAAATGCAACTTGCTCTGTTGCAGTGCTAGTCCACCGTGGGTTCCGTGGATGGTTCGAGCAGGCGGCAGAGACCAGTACTGCTGCACCCAAGAGGGTGTGCATACTTTTCACTGGTGGGCCAGACGATCGGAAAGTTCTAGAGTTGGGGAGCCGGATGGCAGAACATCCAAGAATTAGGTTGGCTGTTGTGAGGTTCACGGGAGAAGAGGAAGCCAAGCACAGGAGAACAGACCACAACTTACCAACATCCGCTACTAACTCGGAAACAGAGAAGGAGCTGGATGATGCCGCAGTAACCGAGTTTAAAAGTAAGTGGAACGGCTCAGTGGAGTTCATAGAAAAGGACGCAAGCAACATGGGAGAGGAGGTACTAGCAATTGGGAAGGCAAAGGAGTACGAACTAGTCATTGTGGGGAAGGATCAACAGCGTCTTGCATCAACCATGGTGGCAAGGATCAAAGATTCTCAGTTGGAGCACGCTGAGCTGGGACACATTGGAGATCTTTTATCTTCTGGTGGTCACGGCATCAATAGTTCGGTACTCGTTATACAGCACCAAGATTTGGCAAATTCAAACCAAACTCCTCTAAAAAATATAGCTAGAGACAAGAATAGTGCGATTACCGATGCTAGCACGGGCACTGAGTCCTCTGTATAA 2472 0.5032 MTPNTTTIQTSSNGAWQGDNPLSYAFPLLIIQSTLVLFVSRFLAFLLKPLRQPKVVAEILGGIVLGPSVIGRNEDFMNLLFPSWSTPILESVASIGLLFFLFLVGLELDLRCLRRSGKRAFGIAIAGLSLPFLFGVGVTFLFQKVIHFNNHKVGTIQYLMFMGVSLSITAFPVLARILAELKLLTTQVGEIAMAAAAFNDVAAWIMLALAVALAGGGHKSPLISIWVLISGMAFVAFMLLVVRPMMNWVARQCCREHDVLDEAYICVTLAGVMLSGFVTDLIGIHSIFGAFVFGLTIPKGGEFACRVTKRIEDFVSSLLLPLFFASSGLKTDVSKLRSVEAWALVLLVISAASAGKILGTFVVAVMCMMPVRESLALGVLMNTKGLVELIVLNIGKEKKVLNDEMFTILVLMALFTTFMTTPIVMAIYKPSRPVSSQIRHRRIPRQLPPLSDLQEELRILACIHGPGDVPSLINFIESIRGSNNSRLKLYVTQLVELSDRSSSILMVQRYRKNGFPLINRFRRGRMHDPIASAFEAYGKIGPVTVHHLTAISALSTMHEDVCHIAQVKRAAMIILPFHMRWRGEDEEAIENIGQGWREVNHRVLQNATCSVAVLVHRGFRGWFEQAAETSTAAPKRVCILFTGGPDDRKVLELGSRMAEHPRIRLAVVRFTGEEEAKHRRTDHNLPTSATNSETEKELDDAAVTEFKSKWNGSVEFIEKDASNMGEEVLAIGKAKEYELVIVGKDQQRLASTMVARIKDSQLEHAELGHIGDLLSSGGHGINSSVLVIQHQDLANSNQTPLKNIARDKNSAITDASTGTESSV 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0831 823 FunFam Cation/H(+) antiporter 15 28 435 - -
Glsi11g0831 823 Gene3D - 28 433 IPR038770 -
Glsi11g0831 823 Pfam Sodium/hydrogen exchanger family 35 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi11g0831 823 Gene3D - 522 768 - -
Glsi11g0831 823 MobiDBLite consensus disorder prediction 676 697 - -
Glsi11g0831 823 PANTHER CATION/H + ANTIPORTER 10 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0831 Glsi-ChrGlsi11 5250038 5254060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0831 76 813 Antiporter Super Family AT3G53720 56.827 0.0 779