Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0824 ATGAGGAAAAGTATGGTCGGCAACCATCAAATTTCTTCTACGCGGATCCAACGCTCACTCTTGATCTTTGCTTCCTCCTCTTTCTTTCTCTACCGAAATTTCATATCCAGTGGAGGCTGTGGTTTGGATCCTCTTAGATCTCTCTTTCCACGCGCTAACACTACCTGCTACAACTCAATGGCCGGAAAAGGAGAGGGTCCAGCTATTGGAATCGATCTTGGGACGACCTACTCTTGCGTCGGAGTCTGGCAACATGACCGTGTTGAGATTATAGCCAACGACCAGGGCAACAGAACGACGCCGTCTTACGTCGGTTTCACTGACACCGAGCGTTTGATCGGTGATGCCGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCCAAGAGGTTGATTGGTCGTAGATTCACTGATGCATCTGTTCAAAGTGACATCAAATTGTGGCCTTTTAAGGTCATTGCTGGCCCTGGTGACAAGCCAATGATTGTAGTCAACTACAAGGGTGAAGATAAGCAATTTGCTGCAGAAGAGATATCTTCTATGGTACTTATGAAGATGCGTGAGATTGCGGAGGCCTACCTTGGCTCTACAATAAAAAACGCTGTTGTTACTGTCCCCGCCTACTTTAATGACTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTTATCGCTGGACTTAATGTCATGCGTATTATAAATGAGCCTACAGCTGCGGCCATTGCTTATGGTCTTGACAAGAAGGCAACCAGTGTTGGCGAGAAAAATGTCTTGATTTTTGATCTTGGTGGTGGTACTTTTGATGTCTCTTTACTTACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCTGGAGACACCCATCTTGGAGGTGAGGATTTTGATAACAGAATGGTGAACCACTTTGTCCAGGAGTTCAAGAGAAAACACAAGAAGGACATTAGTGGCAACCCCAGAGCACTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCTAAGAGAACTCTGTCGTCCACTGCCCAGACCACTATTGAAATTGATTCTCTGTATGAGGGAGTTGATTTCTACTCCACCATTACTCGTGCCAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGTTTAAGAGATGCAAAGATGGACAAGAGGACTATCCATGATGTTGTCCTTGTTGGTGGTTCTACTAGAATTCCCAAGGTTCAACAACTTCTTCAGGATTTCTTCAATGGGAAAGAGCTCTGCAAGAGCATTAATCCCGACGAGGCTGTTGCATATGGGGCTGCTGTTCAGGCTGCTATCTTGAGTGGCGAGGGTAATGAGAAGGTCCAGGATCTTCTCCTTCTGGATGTCACCCCACTCTCGCTTGGTTTGGAAACTGCTGGTGGTGTGATGACAGTATTGATTCCTAGGAACACTACCATCCCAACAAAGAAAGAACAGGTCTTCTCTACCTATTCGGACAATCAGCCTGGTGTGTTGATCCAGGTCTACGAAGGTGAGAGAACAAGGACTAGAGATAACAACTTGCTGGGTAAATTTGAACTCTCAGGCATTCCTCCTGCCCCCAGGGGTGTTCCACAAATTACAGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGATAAGACTACGGGCCAGAAGAATAAAATCACCATCACCAATGACAAGGGTAGACTATCAAAGGAAGAAATTGAGAAAATGGTTCAAGAGGCCGAGAAGTACAAATCTGAAGATGAAGAGCATAAGAAGAAGGTCGAGGCAAAGAATGCATTGGAGAACTACGCATACAACATGAGGAATACCGTGAAGGATGAGAAGATTGGCGGAAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGACGCCATTGAGCAGGCTATCCATTGGCTTGACAGCAACCAACTTGCAGAAGCGGATGAGTTTGAGGACAAAATGAAGGAACTGGAAAGCATCTGCAACCCCATTATCGCCAAGATGTACCAGGGTGGTGCTGGTCCTGACATGGGTGGAGCTATGGATGACGATGCTCCATCTGGTGGAAATGGTGCTGCCGGCCCCAAGATTGAGGAAGTGGACTAA 2127 0.465 MRKSMVGNHQISSTRIQRSLLIFASSSFFLYRNFISSGGCGLDPLRSLFPRANTTCYNSMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFTDASVQSDIKLWPFKVIAGPGDKPMIVVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRTIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGGKLDPADKKKIEDAIEQAIHWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDMGGAMDDDAPSGGNGAAGPKIEEVD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0824 708 FunFam Heat shock 70 kDa 294 377 - -
Glsi11g0824 708 ProSitePatterns Heat shock hsp70 proteins family signature 1. 71 78 IPR018181 -
Glsi11g0824 708 Coils Coil 580 600 - -
Glsi11g0824 708 FunFam Heat shock 70 kDa 450 604 - -
Glsi11g0824 708 Gene3D - 130 185 - -
Glsi11g0824 708 Gene3D Actin; Chain A, domain 4 294 377 - -
Glsi11g0824 708 FunFam Heat shock 70 kDa protein 130 185 - -
Glsi11g0824 708 MobiDBLite consensus disorder prediction 679 708 - -
Glsi11g0824 708 Gene3D - 69 443 - -
Glsi11g0824 708 PANTHER HEAT SHOCK PROTEIN 70KDA 68 642 IPR013126 GO:0005524|GO:0140662
Glsi11g0824 708 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 602 683 IPR029048 -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 536 552 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 428 448 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 67 80 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 205 225 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 396 412 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 455 474 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 95 107 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 117 125 - -
Glsi11g0824 708 PRINTS 70kDa heat shock protein signature 268 278 - -
Glsi11g0824 708 Gene3D - 251 425 - -
Glsi11g0824 708 FunFam Heat shock 70 kDa protein 256 318 - -
Glsi11g0824 708 SUPERFAMILY Actin-like ATPase domain 257 447 IPR043129 -
Glsi11g0824 708 ProSitePatterns Heat shock hsp70 proteins family signature 2. 262 275 IPR018181 -
Glsi11g0824 708 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 451 608 IPR029047 -
Glsi11g0824 708 FunFam Heat shock protein 70 69 255 - -
Glsi11g0824 708 FunFam Heat shock cognate 70 kDa protein 2 378 425 - -
Glsi11g0824 708 ProSitePatterns Heat shock hsp70 proteins family signature 3. 399 413 IPR018181 -
Glsi11g0824 708 FunFam Heat shock 70 kDa protein 598 708 - -
Glsi11g0824 708 SUPERFAMILY Actin-like ATPase domain 67 250 IPR043129 -
Glsi11g0824 708 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 450 603 IPR029047 -
Glsi11g0824 708 Gene3D - 604 678 IPR029048 -
Glsi11g0824 708 Pfam Hsp70 protein 68 677 IPR013126 GO:0005524|GO:0140662
Glsi11g0824 708 CDD HSPA1-2_6-8-like_NBD 68 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0824 Glsi-ChrGlsi11 5199780 5202642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0824 60 708 Calmodulin-binding Proteins AT3G12580 92.320 0.0 1231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2941 02 78248160 78250940 Glsi11g0824 11 5199780 5202642 CCT
Glsi02g2941 02 78248160 78250940 Glsi11g0824 11 5199780 5202642 ECH
Glsi11g0824 11 5199780 5202642 Glsi02g2941 02 78248160 78250940 ECH
Glsi11g0824 11 5199780 5202642 Glsi11g0824 11 5199780 5202642 ECH