Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0814 ATGGAAGGTCGCGACTATGACGAGGAACCAAACAAGCTGGCTTTGGAGACTGAAAATTCAGGTACCCAGTTGACAGCACTAGTTGTAGACGATGACATAATCAACCGAATGATCCATCAAAAGCTGTTGAACAGCGTCGGAGTGAAAAACCAGGCTGCCAAAAATGGCAAAGAAGCCATAGACATTCACTGCTCTGGCCAGTGTTTTGACCTTATTCTCATGGACATGGATATGCCTATCATGAATGGCATCGAGGCAACAAGGAAACTTCGTTCAATGGGCATTCACAGCAGAATTGCCGGAGTGTCAGCACGCTCTGTGGAAGCACAAGTACGAGAGTTTATGGAAGCAGGCCTCGACGACTACCAAGAGAAGCCCTTGACCGTTGCTAAGCTTTCTTCAATTCTTCACAACATCAACCCCAATTCTTAG 432 0.4653 MEGRDYDEEPNKLALETENSGTQLTALVVDDDIINRMIHQKLLNSVGVKNQAAKNGKEAIDIHCSGQCFDLILMDMDMPIMNGIEATRKLRSMGIHSRIAGVSARSVEAQVREFMEAGLDDYQEKPLTVAKLSSILHNINPNS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0814 143 CDD REC_hyHK_CKI1_RcsC-like 27 136 - -
Glsi11g0814 143 Pfam Response regulator receiver domain 27 135 IPR001789 GO:0000160
Glsi11g0814 143 SMART REC_2 24 136 IPR001789 GO:0000160
Glsi11g0814 143 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Glsi11g0814 143 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 140 - -
Glsi11g0814 143 SUPERFAMILY CheY-like 24 139 IPR011006 -
Glsi11g0814 143 Gene3D - 4 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0814 Glsi-ChrGlsi11 5147959 5148564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0814 24 139 Response Regulator Gene Family AT3G04280 43.220 1.50e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi11g0814 Response_reg 6.9e-22 CL0304