Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0809 ATGAATGGGGCGCAGAACAGAAAAGTTCACAATATTGAGAAACCTTTTCCAGGATGCTTGGGAAGAATGGTAAACCTCATTGATTTGACTGCAGGTGTAACTGGAAACAGTTTTGGGGTTGGGAAAGAGCGGTGGGTTCTGGTGATATATAAGAGAAAAAGTAGAAGAGAAATACTTGAGCTGAAAGGTCAACATGGAACGCATAACATGCCTTCTTCTTCACTGTCGAGGAGTCAATCAGATGTTACAGGGATCATGATTCCTCCTTTTGGTGATCAAATAGAGAATAAACCGATTGTTTCTGACTTAACAAGAACATCTTCAAAGAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCAAAAGACGTTGACTATAAGCGCAGCCCACCAAATGTAGTTGCCAAATTAATGGGGCTTGAAACCCTCCCACAGGAAGAGCCTAATTTAACCAGGCAAAGAAGCCATAGAAAAGATTGTTCTCAACATATGTGTGGTCATTCAGAGAAGCCATTCAAACATTGGCAGCTGGAAGATAGTTTTATGGACAAGGAAATGCTGCATGAAGTTCATCAGAGCACAGAACAGGTTGATTACAAGGATATTTATGAAATATGGCGGCAATATCAGAGAACAAGCCATGCAAGAGAGAAGACACCAGAGAGAGGAAGGCGGACTGAAGATCAGAAAATTATGCAAGCAAAACATCTGTCTACGGACGAGAAACTATGCCAGTCCAAGGAATTTGAAGGTTCCTTGGATGTTTTAAGTTCCAATAAAGATTTTTTACTCAAGTTTCTTGCTTCTCAAAATCTTTATGAACTTCAGTCTACACCATCACCTGAGACAAAGCGTATAACTGTTCTTAAACCTTCAAAGATGGTTGACAATGAGAAATCTCCTTTTAAGGGGAAGAAGAATGATAAACAGATTAAGCAACCAGCTAATGTTGCTCAAGCAGCTGTATGGGACAAAAACAACCTTGGATACTCTCTAGCCAGTCAAAAAGTAGACGAGTATCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTGGCTCTGGGAAGACACATGAGATCAAGGCTGTGGCATCTCCAACTTCATCATCATCTCAAAATCTGCAAAGTGGAAATTTCTGTCAGGGACCTGAAGATGATGTACTAGAATCAAGAAAAGCAGCAAAAGAGATCACACAGCAAATGCAAGAAAATCCAAGGGGCCTTCAAAGAGATGAAATTTTGTACTCTTCAGGCTTTTCCAATGGCTATACTGGTGATGAGAGCTCATTTAATAAATCAGAAAATGAGTATGCGGTGGGGAATTTTAGTGATTTGGAATTCATGTCTCCATCCCCAAGGCATTCCTGGGATTACATCAATCATTCTGGTGGCCCTTATTCTTCGTCATCCTTCAGTCAGGCATCCTGTTCTCCTGAATCATCAGTTTGCAGAGAGGCAAAGAAGCGGCTTTCTGAAAGATGGGCCATGATGGCATCAAATATGGGTCCTCAAGAAAAAAGGCATGCACGGAGAAGCTCTACTTTGGGTGAGATGCTTGCACTTTCGGATATGAAGAAATCTGTAACATCCAAGGTAGAGGTTATAAATAAAGACCAAGACCCAAGAGAATCTGTTTCTCGTAGTAGTAATTCAAATGAAGAACTTGTGGTTGGTTCTCCTAAAAATCTTCCCAGGTCAAAGTCTGTCCCTGTATCTTCTACTGTCTGTGAAACTGGGTTCAGTGTTGAATATTGTAATTCTGAGGCTAGCAAAACACATGGCTCCAAGGAGCTGACAAAGTCAAAGAGCATGAAATCATCATTTAAAGGGAAAGTTACAAGTTTGTTCTTCTCGAGGAACAAAAGGTCAAGTAAGGAAAAATCTAATCTATCTGAATCTAAAAAAGAATCCCAATGTACTGTTGCTGAAACGTCAAAAAGTCCAGCAAATTCTCCTGGAATCCGTGGGGATGACATGTCTCAAAGCTTGCCCAGTGGTGGCTTTGAAGAACGTTCTCTTCATTCTCTATATGAATCATCAGGCCAAACTTTATCAGATTCAATATCTAAGGGACAACAACAAGGCTTAATTTCTCTAGAGCCTGGATTGACTGAGTCAAAACCCATGGTGCTGGGCATTTCAAACGAAAACCAGGATCAGCCGAGTCCGATCTCGGTTTTAGAACCTCCATTTGAAGACGATGCTGCAGCTCAAGAATCTGTTGACTGTATGAAGGCTGCTCATTTGGGAACACTGGTGCCTTTGAAGTCTAATTTAATCGACAAATCACCGCCTATAGAATCTATAGCCCGGACCCTGTCATGGGATGATTCCTGTGTAGAGCTAGCACGTCCATATCCACTAAAACCCTTGATGATTTCCCTTGATACCAAGATAGAGGAACAAGACTGTCTTGTTGCTGTCCAGAAATTACTATCAGCTGCTGGACTTGATGATCAAGAGCTGTCTGACTCGTTTCACTCTAGATGGCATTCCCTTGAGAGCCCGTTGGACCCATCATTGAGGGACAAATATGCCAATTTGAATGACAAGGAGCCTCTCCATGAGGTCAAGCGAAGGCAGCGGAGATCAAATCAGAAGCTTATATTTGATTGTGTCAATAATGCACTAATGGAAATTACTGGTTATGGATCAGAAAAGTACTTAACGGGCAGGATGTGCAGTGGGAGCCACAGCAGGCACCCAGAGGTTGCATCTCCCCTACTGGTGGACCTCATTTTGGCGCAAATGAAGGAATTAGTATCTAATGAGATGAGTTATGTTTGGGGGGATTGTGAGAACAGCAACAGCCTCATGGTGGAAAGGGTTGTCAGGAAAGAGGCTGTGGGGAAAGGATGGTTTGAGCTTATGGGATTGGAGATGGATAATTTGGGTAGGGAAATAGAAGGGAAGTTGCTGGAAGAGCTTGTGGAGGAGGCCGTGGTTGATTGGACAAGTAGGGTCCGATGA 2985 0.4221 MNGAQNRKVHNIEKPFPGCLGRMVNLIDLTAGVTGNSFGVGKERWVLVIYKRKSRREILELKGQHGTHNMPSSSLSRSQSDVTGIMIPPFGDQIENKPIVSDLTRTSSKKKINGTPIKMLIDQEMSKDVDYKRSPPNVVAKLMGLETLPQEEPNLTRQRSHRKDCSQHMCGHSEKPFKHWQLEDSFMDKEMLHEVHQSTEQVDYKDIYEIWRQYQRTSHAREKTPERGRRTEDQKIMQAKHLSTDEKLCQSKEFEGSLDVLSSNKDFLLKFLASQNLYELQSTPSPETKRITVLKPSKMVDNEKSPFKGKKNDKQIKQPANVAQAAVWDKNNLGYSLASQKVDEYPVQPTRIVVLKPGSGKTHEIKAVASPTSSSSQNLQSGNFCQGPEDDVLESRKAAKEITQQMQENPRGLQRDEILYSSGFSNGYTGDESSFNKSENEYAVGNFSDLEFMSPSPRHSWDYINHSGGPYSSSSFSQASCSPESSVCREAKKRLSERWAMMASNMGPQEKRHARRSSTLGEMLALSDMKKSVTSKVEVINKDQDPRESVSRSSNSNEELVVGSPKNLPRSKSVPVSSTVCETGFSVEYCNSEASKTHGSKELTKSKSMKSSFKGKVTSLFFSRNKRSSKEKSNLSESKKESQCTVAETSKSPANSPGIRGDDMSQSLPSGGFEERSLHSLYESSGQTLSDSISKGQQQGLISLEPGLTESKPMVLGISNENQDQPSPISVLEPPFEDDAAAQESVDCMKAAHLGTLVPLKSNLIDKSPPIESIARTLSWDDSCVELARPYPLKPLMISLDTKIEEQDCLVAVQKLLSAAGLDDQELSDSFHSRWHSLESPLDPSLRDKYANLNDKEPLHEVKRRQRRSNQKLIFDCVNNALMEITGYGSEKYLTGRMCSGSHSRHPEVASPLLVDLILAQMKELVSNEMSYVWGDCENSNSLMVERVVRKEAVGKGWFELMGLEMDNLGREIEGKLLEELVEEAVVDWTSRVR 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0809 994 MobiDBLite consensus disorder prediction 534 575 - -
Glsi11g0809 994 MobiDBLite consensus disorder prediction 368 385 - -
Glsi11g0809 994 MobiDBLite consensus disorder prediction 639 663 - -
Glsi11g0809 994 Pfam Domain of unknown function (DUF4378) 813 984 IPR025486 -
Glsi11g0809 994 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 992 - -
Glsi11g0809 994 MobiDBLite consensus disorder prediction 368 388 - -
Glsi11g0809 994 Pfam DUF761-associated sequence motif 132 150 IPR032795 -
Glsi11g0809 994 MobiDBLite consensus disorder prediction 535 549 - -
Glsi11g0809 994 MobiDBLite consensus disorder prediction 624 673 - -
Glsi11g0809 994 Pfam Protein of unknown function (DUF3741) 233 276 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0809 Glsi-ChrGlsi11 5105055 5109496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0809 1 990 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 41.675 0.0 598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2953 02 78315736 78320141 Glsi11g0809 11 5105055 5109496 CCT
Glsi11g0809 11 5105055 5109496 Glsi11g0809 11 5105055 5109496 ECH