Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0805 ATGTGTTGCTTGCTGCTTCCAATTTTTTGCTGCTTACCATTCCATAAAGTCATACCATTGGCTAGTTTACTTGATTTGGGAGTTGAATTGGGTAAATGCAAGGTGGCCTCCTTATTTTGCGTACGAAGCATTGATCCCATTTCAGGTTCTTATTTCTATGCATTATCAGGCTTATGGTCGAAAGATGAAATTAAGGTTGTTGCTGCCAATCCTATAGTTGGGTCCCATGTTTGGGTAGAGGATCCTGATGTAGCTTGGATAGATGGTGAGGTTTTGGAGGTTAATGGAGAAAATCTTAAAGTTCTTTGCACTTCAGGGAAGAAGGTGCTTGTTAAAGCTTCCAGTATTTATCCTAAAGATACTGAGGTGCCACCATGTGGAGTGGATGATATGACAAAGCTCCCTTATCTGCATGAACCTGGAGTCCTGGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACTGGGAATATATTGATTGCCGTGAACCCTTTTACAAAGCTTCCTCATCTATATGATAGTCATATGATGGCACAATATAAAGGGGCCGCCTTTGGCGAGCTGAGTCCACATCCCTTCGCTGTTGCAGATGCTGCATATAGGCTTATGATTAATGAGGGAATCAGCCAATCAATATTGGTTAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACTAAGTTACTAATGCGTTATCTTGCTTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGGACTGTTGAGCAGAAAGTCCTGGAGTCCAATCCCGTTTTAGAAGCCTTTGGAAATGCAAAGACTGTTAGGAACAATAATTCAAGCCGTTTTGGTAAATTTGTGGAGATTCAATTTGACCAGAGCGGGAGAATTTCAGGAGCTGCTATCAGAACTTATCTTTTGGAAAGATCGCGTGTTTGCCAGCTGTCAGATCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCAACTCCTGAGGAAGTTCAGAAGTACAAATTGGGAAACCCAAGAATGTTTCATTATCTGAATCAATCAAATTGCTATGAGATAGAAGGGCTTGATGAATCTAAAGAATATATTGCAACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGTGGAGCAGGATGCAATATTTCGAGTAGTGGCTGCAATTCTGCATCTTGGAAACATTGAATTTGCCAAAGGGAAGGAAATAGACTCATCTGTGCCCAAGGATGAAAAATCTTGGTTCCATCTACAAACTGTTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGCGATGAAACAATTACAAAATGTTTGGATCCAGAAACTGCTGCACTCAGCCGAGATGCTTTGGCTAAAATTGTGTACACGAGGTTGTTTGACTGGCTGGTGGAAAGAATTAATAGTTCCATTGGTCAAGACCCCAAGTCCAAGTCCTTAATTGGCGTTCTGGATATCTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACAAACGAAAAGCTTCAGCAACATTTTAATCAGCACGTTTTTAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGCTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGCGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGTCGCGTAGTGACTTCACAATTTGCCATTATGCTGGGGATGTCACGTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAGGCACTTCTTAGTGCTTCCAAATGCCCCTTTGTATCGGGTTTGTTCCCCCCCTTACCTGAGGAATCATCTAAACAATCAAAGTTCTCTTCAATAGGTTCTCGGTTTAAGCAACAATTGCAATCACTACTCGAAACTCTCAGTGCCACTGAGCCACATTACATTCGTTGTGTAAAACCGAATAATTTTCTTAAGCCAGCAATCTTTGAGCATAAAAATGTTTTGCTGCAACTGCGTTGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCTGGATATCCAACTAGAAAAACCTTTGATGAATTTGTGGATAGATTTAGCCTCCTTGCACCTGAAGCTTTGGATGGAAGTTCTGATGAGATCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTGAAAGGCTACCAGATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCTGAACTTGATACCCGTAGGAGTGAGGTCTTAGGAAGGTCAGCAAGCATAATTCAGAGGAAAGTTCGTTCATATTTGGCACGCCGAAGTTTTTTCTTGCTTCGTTTATCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCATGTTTATGAGGGAAAGCGGCAGGAGGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATATTGCTAGGAAGGCATACAAAGAATTGTATACCTCTGCTGTTTCTATTCAGACTGGTATGCGGAGAATGACTGCTTGTTCTGAGCTACGCTTTAGGAGGCAGACTAGAGCAGCAATTGTTATACAGAGCCATTTCCGGAAATACTTGGCACGACATCATTTTAAGAACTTAAAGAAAGCAGCTATTACAACACAGTGTGCATGGAGAGGAAGAGTTGCTCGGCGAGAATTACGAAAGCTCAAGATGTCTGCAAGGGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATAAGGGTTGACATGGAAGAAGCAAAAACACAAGAAAATGAAAGATTACAATCTTCTCTGCAAGAGATGCAACTTCAGTTTAAAGAGACAAAAGTACTACTTGAAAAGGAGCGCGAGGCTGCAAAAAGGGCAGCAGAGAGAGTACCTGTCATTCAGGAGGTTCCAGTTGTTGACCATGCATTGTTGGAGAAGCTCACTAATGAAAATGAGAAACTCAAGACCTTGGTGAGTTCACTGGAAAAGAAAATTGATGAAACAGAAAAAAGGTGTGAAGAGGCAAACAAAACTAGTGAAGAAAGATTGAAGCAGTCTTTGGACGCAGAATCAAAGATAATCCAGTTGAAGACTGCTATGCAAAGGCTTGAAGAAAAGTTCACAGACATTGAATCTGAAAACCAGATTCTTCGGCAACAATCTTTGCTAAATTCAACTGTGAAAAAGATGTCAGAGCACCTCTCAACCCCTGCAGATGAGAAGTTGCAAAATGGTCACCATGCGGTGGAAGAGCATAAAGCTTTGGAAACACAGATTGTTACACCTGTGAAAAAGTTTGGTACAGAATCTGATAGCAAATTGAGGAGATCCTACATTGAACGTCAGCATGAGAATGTTGATGCGTTGATCAACTGTGTTATAAAAAATATTGGGTTCAGTCATGGAAAGCCTGTTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGGACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCAGCAATTGAGAATCAAGATGACAATAATCTTATGGCTTATTGGCTATCAAATACATCAGCGTTATTATTTTTGCTCCAACAAAGTCTGAAATCTGGTGGTGCAGCTGATGCAACTCCAGTTAAAAAACCACCAAATCCAACGTCCCTCTTTGGAAGAATGACTATGGGATTTCGTTCATCCCCTTCCTCCACCAACCTTGCTGCCCCTGCATTGGAGGTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTGCTTTTTAAGCAGCAGCTCACAGCCTATGTGGAGAAAATATATGGTATCATTCGGGACAACTTGAAGAAGGAGTTAACATCATTCCTTTCATTATGCATCCAGGCACCAAGAACATCAAAGGGAGTTTTACGGTCTGGTCGATCTTTTGGTAAAGATTCTCCAATGGGTCACTGGCAGAGTATTATTGAATCCCTCAACACCATCCTCTATACACTGAAAGAGAACTTTGTGCCTCCAGTCCTTGTCCAAAAGATCTTTACTCAAACCTTCTCGTATATTAATGTACAACTCTTCAATAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATACGTGAAAGCTGGATTAGCAGAATTGGAGCTATGGTGCTGCCAAGCAAAAGAGGAGTATGCAGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCTGTGGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGACGAAATTACCAATGACTTGTGCCCTATCCTGAGCGTCCAGCAGCTGTATAGAATATGTACACTTTATTGGGATGCTAATTATAATACTCGAAGTGTATCCCCTGATGTCCTTTCAAGCATGAGGGTGCTTATGGCTGAGGACTCAAATAACGCTCTCAGTGATTCTTTCTTGTTGGATGACAATTCCAGTATCCCCTTCTCGGTGGATGACCTCTCTACAACACTGCAAGAGAAGGACTTCTCAGACATGAAACCAGCAGATGAACTTCTTGAGAATCCAGCCTTCCAATTTTTAAATGAGTAG 4731 0.4124 MCCLLLPIFCCLPFHKVIPLASLLDLGVELGKCKVASLFCVRSIDPISGSYFYALSGLWSKDEIKVVAANPIVGSHVWVEDPDVAWIDGEVLEVNGENLKVLCTSGKKVLVKASSIYPKDTEVPPCGVDDMTKLPYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAATPEEVQKYKLGNPRMFHYLNQSNCYEIEGLDESKEYIATRRAMDVVGISSVEQDAIFRVVAAILHLGNIEFAKGKEIDSSVPKDEKSWFHLQTVAELFMCDAKALEDSLCKRVIVTRDETITKCLDPETAALSRDALAKIVYTRLFDWLVERINSSIGQDPKSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCPFVSGLFPPLPEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNFLKPAIFEHKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEITACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTRRSEVLGRSASIIQRKVRSYLARRSFFLLRLSAIQIQAACRGQLARHVYEGKRQEASSLMIQRYFRMHIARKAYKELYTSAVSIQTGMRRMTACSELRFRRQTRAAIVIQSHFRKYLARHHFKNLKKAAITTQCAWRGRVARRELRKLKMSARETGALQAAKNKLEKQVEDLTLRLQLEKRIRVDMEEAKTQENERLQSSLQEMQLQFKETKVLLEKEREAAKRAAERVPVIQEVPVVDHALLEKLTNENEKLKTLVSSLEKKIDETEKRCEEANKTSEERLKQSLDAESKIIQLKTAMQRLEEKFTDIESENQILRQQSLLNSTVKKMSEHLSTPADEKLQNGHHAVEEHKALETQIVTPVKKFGTESDSKLRRSYIERQHENVDALINCVIKNIGFSHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNNLMAYWLSNTSALLFLLQQSLKSGGAADATPVKKPPNPTSLFGRMTMGFRSSPSSTNLAAPALEVVRKVEAKYPALLFKQQLTAYVEKIYGIIRDNLKKELTSFLSLCIQAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTILYTLKENFVPPVLVQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNALSDSFLLDDNSSIPFSVDDLSTTLQEKDFSDMKPADELLENPAFQFLNE 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0805 1576 Gene3D - 731 794 - -
Glsi11g0805 1576 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 72 121 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 PRINTS Myosin heavy chain signature 156 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 PRINTS Myosin heavy chain signature 260 287 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 PRINTS Myosin heavy chain signature 493 521 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 PRINTS Myosin heavy chain signature 546 574 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 PRINTS Myosin heavy chain signature 213 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 ProSiteProfiles IQ motif profile. 847 876 IPR000048 GO:0005515
Glsi11g0805 1576 FunFam Myosin XI D 799 848 - -
Glsi11g0805 1576 Pfam IQ calmodulin-binding motif 825 842 IPR000048 GO:0005515
Glsi11g0805 1576 Pfam IQ calmodulin-binding motif 920 939 IPR000048 GO:0005515
Glsi11g0805 1576 Pfam IQ calmodulin-binding motif 801 819 IPR000048 GO:0005515
Glsi11g0805 1576 Pfam IQ calmodulin-binding motif 850 868 IPR000048 GO:0005515
Glsi11g0805 1576 Pfam IQ calmodulin-binding motif 896 916 IPR000048 GO:0005515
Glsi11g0805 1576 PANTHER MYOSIN 890 1510 - -
Glsi11g0805 1576 Pfam DIL domain 1398 1501 IPR002710 -
Glsi11g0805 1576 Gene3D Myosin VI head, motor domain, U50 subdomain 376 665 - -
Glsi11g0805 1576 CDD MyosinXI_CBD 1172 1545 IPR037975 GO:0007015
Glsi11g0805 1576 Pfam Myosin head (motor domain) 128 784 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 Gene3D - 503 687 - -
Glsi11g0805 1576 ProSiteProfiles IQ motif profile. 918 947 IPR000048 GO:0005515
Glsi11g0805 1576 FunFam Myosin 2 376 490 - -
Glsi11g0805 1576 FunFam Class V myosin 503 645 - -
Glsi11g0805 1576 Gene3D Kinesin motor domain 129 726 IPR036961 -
Glsi11g0805 1576 FunFam unconventional myosin-Va 898 945 - -
Glsi11g0805 1576 Gene3D - 799 847 - -
Glsi11g0805 1576 Gene3D - 848 896 - -
Glsi11g0805 1576 Gene3D - 897 946 - -
Glsi11g0805 1576 Gene3D - 316 374 - -
Glsi11g0805 1576 ProSiteProfiles IQ motif profile. 822 851 IPR000048 GO:0005515
Glsi11g0805 1576 SMART iq_5 846 868 IPR000048 GO:0005515
Glsi11g0805 1576 SMART iq_5 798 820 IPR000048 GO:0005515
Glsi11g0805 1576 SMART iq_5 917 939 IPR000048 GO:0005515
Glsi11g0805 1576 SMART iq_5 821 843 IPR000048 GO:0005515
Glsi11g0805 1576 SMART iq_5 894 916 IPR000048 GO:0005515
Glsi11g0805 1576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 848 IPR027417 -
Glsi11g0805 1576 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Glsi11g0805 1576 ProSiteProfiles Myosin motor domain profile. 126 796 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 SMART DIL_2 1397 1504 IPR002710 -
Glsi11g0805 1576 ProSiteProfiles Dilute domain profile. 1221 1522 IPR002710 -
Glsi11g0805 1576 SMART MYSc_2a 121 797 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 Pfam Myosin N-terminal SH3-like domain 73 116 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi11g0805 1576 Coils Coil 1036 1112 - -
Glsi11g0805 1576 CDD MYSc_Myo11 140 784 IPR036018 -
Glsi11g0805 1576 Coils Coil 948 1014 - -
Glsi11g0805 1576 FunFam unconventional myosin-Va 849 897 - -
Glsi11g0805 1576 FunFam Myosin heavy chain 316 371 - -
Glsi11g0805 1576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 849 947 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0805 Glsi-ChrGlsi11 5053191 5074658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0805 66 1575 Myosins gene family AT5G43900 75.644 0.0 2363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2961 02 78367299 78385023 Glsi11g0805 11 5053191 5074658 CCT
Glsi11g0092 11 690659 705409 Glsi11g0805 11 5053191 5074658 CCT
Glsi11g0805 11 5053191 5074658 Glsi11g0805 11 5053191 5074658 ECH