Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0800 ATGGAAGTTGCTTGGTACTATACGGCAAGGTTAGAGAGCTCGAAGCTGTTCGTTTCTGAAAATGGTTTTTGGTTAAACATGGTGCGGCGAGAGAAAATGCCAACTCTGGTTGTCTTCCTCTTTGTTCTTCTTAATTTGCTTTTGTCTTGCTCAGGTCATTTTTCTTTGTCAACATTCATGTCTCCTTCTCCAACGCTATATCAGCCTTTATCTGTCAGAGATATGTTAGTTAAACATGTGAAGTCAGTTTCTATGAGTGTGTCATTTGCTTCTTCAAAACCAGCTAAAACTTGGTTAGTTAAGCCTTCTTTTGGACCGTCTTCAGCTCCTACGCCATCTCCATCTAGCCAAGGTCCTAGTGTGACTCCAAAACCAGGACACCGTCATCATCACCGTCATCATCACCATAGTGTGAGAACTCATGTAATAGCTCCATCCCCTTCTAAAGACCAAGCTTGTGACCAAATCTGTATGGAGCCGCTCACAGCAACTCCATTTGGTTCACCTTGTGGCTGTGTATTTCCCATGAAAGTCAGACTTATACTGGATGTAGCTCCTTATGCTGTTTTTCCGGTAATGAATGAGTTAGAGATTGAGGTTGCATCAGGCACATATTTAAAACAGAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAAAACTGTAGTTGATATTAACTTGGTTCCACTGGGAGAGAGGTTTGACAACACAACTGCAGTTCTGACATATGAGAGGTTTTGGCATAAGAAAGTTCCTCTAAATGGGAGCCTGTTTGGTGACTATGCAGTTGTGTACATTAGTTATCCAGGGATTCCATCATCACCACCACTTGGAAGTTTATCTGGGAGTGGTCCCAGTGGAGTTGCTGGACGTAGTCTTCCAATCACGGCCAACTTTATCAGCAAAAACCAGAAAACAAATGTTAGAACCATAATCATCATTGCTTTATCTGCCTTTGTACTCTTGTTGGTTTTGGTTGGAGCATTATTAATCTTTTTGCAATGGAGGAAGATTAAGAGACCATCAAGTGCTGTTGGTCCTACATTTACATCATCTATAAACAAGAGATCTGGCATGGGGTTTATGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCCCTTATGTCTACCATGGCTCCTTCTATACTGTCCGTTAGAACATTTTCGCTGTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAACAGGTATTAGGAGAAGGGGGATTTGGACGTGTTTACAGTGGGACATTAGAAGATGGATCTGAAGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCACCGTAATCTTGTGAAACTCATTGGTATATGCATTGAAGGGCACAGGCGTTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAGAAGAAGGGGCCTCTAGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCTGCAAGAGGATTGGCCTATCTTCATGAGGATTCTAATCCTCGTGTAATTCACCGAGACTTTAAAGCTAGTAATGTGTTATTAGAAGATGACTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACACGTGTCATGGGAACTTTTGGGTACGTTGCCCCAGAATATGCAATGACAGGTCATTTACTTGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTTCTTGAACTTCTTACTGGAAGAAAACCAGTGGACATGTCTCAACCTCCTGGACAGGAGAACCTAGTAACATGGGCACGGCCACTCTTGACGAGTAGAGAAGGTTTAGAACAGCTAGTGGATCCAGCTTTGGCTGGAAGTTATGATTTTGACGACATGGCAAAGGTGGCTGCCATTGCTTCCATGTGTGTTCACTCTGAGGTCACTCACAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTAAAGTTGATATACAATGACACAGATGAGACTTGTGGGGATTGCGGTAGTCAGAAAGAGTCTTCTGCTCAAGAGTCTGACATTAGAGGTGATCTTGCGCCTTCTGATAGTAGTTGGTGGAATGCTGGAGGGGCAACCCCACGATTGACTTATGGGCAAGCATCTTCCTTTATCACAATGGACTACAGTTCTGGGCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTTATTGGAGACGAGATTTCTTTACCAATTAGGCATGGGAATAGATCAGGTCCCCTAAGAACAGTCCGAAGCAAGCTATCTATGTATAGATTTACCGGAAGTCGGAGTGAACACGGGGGACTTCCTTCCAAGCGTGTTTTGAGCGATGGTTACTGGGTTTAA 2430 0.4313 MEVAWYYTARLESSKLFVSENGFWLNMVRREKMPTLVVFLFVLLNLLLSCSGHFSLSTFMSPSPTLYQPLSVRDMLVKHVKSVSMSVSFASSKPAKTWLVKPSFGPSSAPTPSPSSQGPSVTPKPGHRHHHRHHHHSVRTHVIAPSPSKDQACDQICMEPLTATPFGSPCGCVFPMKVRLILDVAPYAVFPVMNELEIEVASGTYLKQSQVKIMGASADSQNQGKTVVDINLVPLGERFDNTTAVLTYERFWHKKVPLNGSLFGDYAVVYISYPGIPSSPPLGSLSGSGPSGVAGRSLPITANFISKNQKTNVRTIIIIALSAFVLLLVLVGALLIFLQWRKIKRPSSAVGPTFTSSINKRSGMGFMLSSSITSSTSVSLMSTMAPSILSVRTFSLSELEKATDKFSSKQVLGEGGFGRVYSGTLEDGSEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGHRRCLVYELVHNGSVESHLHGVDKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPALAGSYDFDDMAKVAAIASMCVHSEVTHRPFMGEVVQALKLIYNDTDETCGDCGSQKESSAQESDIRGDLAPSDSSWWNAGGATPRLTYGQASSFITMDYSSGPLEEMENRPFSTSSFIGDEISLPIRHGNRSGPLRTVRSKLSMYRFTGSRSEHGGLPSKRVLSDGYWV 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0800 809 MobiDBLite consensus disorder prediction 103 145 - -
Glsi11g0800 809 MobiDBLite consensus disorder prediction 124 140 - -
Glsi11g0800 809 Pfam Protein tyrosine and serine/threonine kinase 409 678 IPR001245 GO:0004672|GO:0006468
Glsi11g0800 809 SUPERFAMILY Protein kinase-like (PK-like) 389 678 IPR011009 -
Glsi11g0800 809 PANTHER OS01G0750732 PROTEIN 146 702 - -
Glsi11g0800 809 FunFam Receptor-like serine/threonine-protein kinase ALE2 482 700 - -
Glsi11g0800 809 ProSiteProfiles Protein kinase domain profile. 406 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0800 809 FunFam receptor-like serine/threonine-protein kinase ALE2 379 481 - -
Glsi11g0800 809 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Glsi11g0800 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Glsi11g0800 809 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Glsi11g0800 809 MobiDBLite consensus disorder prediction 690 712 - -
Glsi11g0800 809 CDD STKc_IRAK 412 681 - -
Glsi11g0800 809 Gene3D Transferase(Phosphotransferase) domain 1 482 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0800 Glsi-ChrGlsi11 5014318 5020700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0800 156 795 Receptor kinase-like Gene Family AT5G56890 54.669 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi11g0800 PK_Tyr_Ser-Thr 8.1e-48 CL0016