Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0796 ATGGCTACTACTCTCACATGCTCCGCCACTGAACTTCACCTTCTTCTTGGTAACACTACCGATTCCACAGCTGCGGCTGAATACATTTGTGGCCGTTTTGAAGCTATTTCCAACAAGTTTATGGACACCGCCTACGCTGTCGACAACACCTACCTTCTCTTCTCTGCCTACCTTGTGTTTGCCATGCAGCTTGGCTTTGCCATGCTCTGTGCTGGTTCCGTACGCGCCAAGAACACCATGAACATTATGCTTACCAATGTGCTTGATGCTGCAACTGGTGGTATTTTCTATTATCTATTTGGGTTTGCCTTGTCTTACGGTAGCCCATCAAATGGATTCATTGGGCAGCATTTCTTTGGCCTAGAGAAATTCCCTTCCCCATCTTTTGACTATGGGTACTTCCTTTATCAATGGGCTTTTGCCATTGCAGCCGCTGGGATCACCAGTGGTTCCATTGCAGAGAGAACCCAATTCGTTGCCTATTTGATTTACTCGTCCTTCTTGACGGGCTTGGTCTATCCTATAGTCTCCCATTGGTTCTGGTCTGTGGATGGTTGGGGTAGCCCTGCTCGCTCTGAAAATCTGTTATTCGGATCTGGGGTCATCGATTTTGCTGGTTCAGGTGTGGTACACTTGGTAGGAGCTGTGGCTGGCTTCTGGGGTGCCTTTATTGAAGGCCCTCGTATTGGCAGATTTGATCACGAGGGGAAATCTGTCGCAATGCCCGGGCACAGTGGAACCTTGGTTGTTCTGGGCACATTCTTATTGTGGTTTGGGTGGTATGGATTCAACCCTGGATCATTTATTAACATCTTGAAGACTTACGGAGGAGTGAGTGGTTCTTTCTATGGGCAATGGAGTGCGATTGGGAGGACTGCAGTGACCACAACTCTTGCCGGATGCTCAGCAGCACTAACCACACTCTTTGGCAAACGTTTTCTTAGTGGGCATTGGAATGTCACTGACGTTTGCAATGGCTTGCTTGGTGGGTTCGCAGCAATCACCTCAGGGTGCTCTGTGGTTGACCCATGGGCTGCAATTTTATGTGGATTTGTGGCTGCTTGGGTACTCATTGGATGCAACACGCTGGCAGAGAGATTCAAGTACGATGACCCATTGGAGGCAGCGCAACTTCACGGTGGTTGTGGGTCATGGGGGATAATCTTCACAGCATTATTTGCTAATAAACGATATGTGAATGAGGTGTATCCAGGGCTACCTGATAGACCATACGGGCTGTTGATGGGAGGGGGTGGAAAGCTCTTGGCAGCACATGTTATCCAGATTTTGGTGATCGCCGCGTGGGTGAGCGTTACCATGGGAACAGTGTTCTTCTTGCTCCACAAATTGAGGCTACTGAGGACTTCACCTGATGAGGAGATGGCTGGGTTGGATTTAACCAGCCATGGTGGATTGGCGTATGTGTATAACGAGGAGGTCGAACTAGCACAAAGGCGTGCCTTTGGGGCGACAAAGGTGGATTCTTCCGCTGTTTGA 1497 0.4916 MATTLTCSATELHLLLGNTTDSTAAAEYICGRFEAISNKFMDTAYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFALSYGSPSNGFIGQHFFGLEKFPSPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSVDGWGSPARSENLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKSVAMPGHSGTLVVLGTFLLWFGWYGFNPGSFINILKTYGGVSGSFYGQWSAIGRTAVTTTLAGCSAALTTLFGKRFLSGHWNVTDVCNGLLGGFAAITSGCSVVDPWAAILCGFVAAWVLIGCNTLAERFKYDDPLEAAQLHGGCGSWGIIFTALFANKRYVNEVYPGLPDRPYGLLMGGGGKLLAAHVIQILVIAAWVSVTMGTVFFLLHKLRLLRTSPDEEMAGLDLTSHGGLAYVYNEEVELAQRRAFGATKVDSSAV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0796 498 FunFam Ammonium transporter 29 488 - -
Glsi11g0796 498 PANTHER AMMONIUM TRANSPORTER 19 470 - -
Glsi11g0796 498 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Glsi11g0796 498 SUPERFAMILY Ammonium transporter 45 454 - -
Glsi11g0796 498 NCBIfam ammonium transporter 48 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi11g0796 498 Pfam Ammonium Transporter Family 51 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Glsi11g0796 498 Gene3D Ammonium transporter AmtB like domains 29 491 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0796 Glsi-ChrGlsi11 4993011 4994507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0796 1 479 Inorganic Solute Cotransporters AT4G28700 78.054 0.0 747