Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0795 ATGGAGCCTATGCCCGTCATATTGGATATAAGCTCCGACGAAGAACAGGATTTGGGGAAGGGACCCGACAGCTTCAACTACGATTGGGTTAAGGAGCTTCTGGACCAGACTGATACAGAATCAGACGATTCCGACGAGGTTATCGTCGTCCGCGAGGTGAAACCCAAACTGAAGGCAAAGCCTTCGAGATCGACTGTGAAAGACGTGGATGATGATTGCGTAGTTCTGGATGGTGACCCAGAAAACCGTGTTACATCCTTGAATGAGGCGGCAACTGGGTCAGACGAGTTGCTCATAGTTGGGGAGAAGGGCCAGGAGTACTGTGAAATGGGCCTTCATATCCTATTGCAACTTACATGGTTTCTTTGGCTTAAGGATCTACCATATAGTCTCTGTTCTGAAGCATGCAATAGGTTTTTCTCAGATTCTTTACCAAAACTTGGATCTGGATGTGTAATTGCATGTAGAGACTATCCTCATCCCCGACATCTGTGTGCTAAATTTCCTTTCTCTTCCACCCCTCATGAGAGACACTGTGACCAGTGCCATTGTTATGTCTGCGACTCACTAGCACCATGTCTAAAGTGGTGCATTGGCATGCCCAGTACAGATCATTGTCATGCAACTGATAAAGCCGAGACATGGAAAATTCAGAGGACAAATTTTAAGATGGGCATAAGTGCTCCATTACCAGCTTCAACTAATTATGATACTTCACCTTGTATGGCACATCCCCAGGGTAACCAAGTTCTGCCACTTGATATCATTCGATTGTCTGAAAATTCTGTATTGCGGATTTTGGCATCTGGGTCAAGTGCAAATCTTACTTGCTCCTCACTCAATCCCACACAAAAAAGTCAGGCGTCCAGGCCAACTGCAATTTGTGCTCGCTCCTCCTCACTAGATTCCACCATACAGAATGAGGTCTCCAGGCCAAATGCTATCCCTGTAGGCTCCTCAGCCACCATTTTTACAGTTCCAAATGGCACAAACCATGGTAGATTTCAAGAGTCACGATCTACTTTGGCCAGAAACAGATGCCAGCCTCCCTCATTTCCCAGGCAGTCGCTGGGTGTGCGTAATAATTCCATCCGAAGGGACCGAAGAAATGGTGCATTTACTGTTGGTCCTCAGTCTTATCCTTCTCATATGATGTCCAAGGGGATAGGCAATGTTGCCACTCAGACAGTGAACCATTCTGCTCATGGTTCACCTGGTCGCAGCAATCATAATAATCCAGCAGAGCAGGATGACAGATATCATGCTACAACAGGATTATCAAATGACAGAAATCAGAATGGGCGTAATGATATTTGGCTCACCACAAATTTTTCTTCATACCCACATTCAAGCTCTGCACAGACCAGCCTGAACTGCGTTAGTGGAAATGCTGTGACTTCTAAAACCCAAGCATTCAGTCAGCCATTGCCCCAATCATATTTTAGCCAGAACATTGATCAATCTTGTAATCAGGGTAATGAAGTTCCAAGTAATGTGGCTTGCCTGAATAGCAATCAGTATGAGAATGAGCATCAGATTGGGAGTTACAATGAAATTGCCAGTGAAAATATTATTCAATGTGGAAATCCAAGTCAAGATACCTGCCAACTGCAACCTAACGAGAGCAATCAAATTGAAACTACCAGAAAGGAAGATTTTTCAGTTTTCGTAGCAAGTTGGACGAACAATACCAGTCCAAGCATTGAGCCTCTAACTGAGAGTTCTCATGTACAAAGCTCAGGGTTTATAAATGAACCACCTGGGATCAAGGAGTCTGGTGTCCAGTTTGCTGGAAGCACTAACCTCAGTGATCTTGACGATATTGAGAATTGGTTTTTTGATACAGATTCTGTTCCGGTGACAGTGGATGCTGCTTTTCCATCTGAGTTGAATATCCCATCTCCTGATCTTGGCCCAATTGATACGGGTTTGCTTCTATTTGATAATGAGAACTCATGGAATGGTCTTGCACAAGCGTACTTTGAGAAATATGCGCCTTCATTGAAGGCTAATCAACTCGTGTTAGTAGCCAAAATTCGACCATGTTTAGATGTCGTTCCCCTAGTCCGTCTCAGTCGCAGCGCAAACTGTGAATTAGAGCAAAGAAGGATGGCGCTATGGATGGAAAAGGGTTCTGAGCCCTTGACCGAAAGTGAGAAAGCTGACCTTGATGCTATTGCTGCACTTAAAGAGTCTGCTGCCATTGAACTTAAGGAAAAGGGCAACGAATATGTCAAGATGGGTAAAAAGCATTATTCTGATGCCATTGATTGTTACACAAGGGCAATAGATCAGAAAGTCTTAACTGACTCTGAGAACTCGGTTCTTTTTGCAAATAGAGCGCATGTAAATTTACTGCTGGGAAATTATAGACGTTCCCTGATAGATGCTGAGGAGGCAATTAAGTTATGCCCCTCAAATATAAAGGCTATTTATAGAGCTGCCAAAGCATCACTTTCGTTGAATTTGTTGGCTGAAGCACAGTCCCATTGTCAAAATGGCCTTCAGTTGGACCCCAGTAATGAAGAATTGAAGAAGCTTGGCCAGCAAATTGATCTAAAGATATCAGAGCACGAAAAACATGAGGCTGAAGTCTCCAAAGCTGTTGCAGAGACAAAGGAACTTGTGTCTGCAATAGAGAATAGAGGCTTGAAGATGGGAAAGGCAATGTTTCGGGAGCTTACTGGATTAAAAAAGCCTGTATTGGACAAAAATAATATTCTTCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTCATGTCCAGTGACTTCATTGAGGATTTCTGTGAGACTGACATGTTCACAGTTCATCTTGATATGATATCCTTCTCTATAAATTGCTTTATATATCAGCCGCTGCCATGGGATGATAAAAACAATTACAAACGTGAATTTGTTGAACTATACTATGAGGCTGGCTCTGGAGTTTGTCTATCAAAGACAAAACTTATTCAGTGTTTATTAGAGGGGACTGCAGCTTCTCATGGGGAAAGTGTTGGTGAAGATAAAGACACAGTTGATGATTGCAACCACGTCGTCACAGGCACTCCTAAATGGATCAAAGTAAACGAAAGGGCAAAGCTCCATGATGTTCTGAAAGATCCCAATTTTATCATTCCCGGGATCCCAGTCTTCTATGTGGTTTCAAAGCGATCCAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGGCTCCTCCTAGCATATGA 3207 0.4334 MEPMPVILDISSDEEQDLGKGPDSFNYDWVKELLDQTDTESDDSDEVIVVREVKPKLKAKPSRSTVKDVDDDCVVLDGDPENRVTSLNEAATGSDELLIVGEKGQEYCEMGLHILLQLTWFLWLKDLPYSLCSEACNRFFSDSLPKLGSGCVIACRDYPHPRHLCAKFPFSSTPHERHCDQCHCYVCDSLAPCLKWCIGMPSTDHCHATDKAETWKIQRTNFKMGISAPLPASTNYDTSPCMAHPQGNQVLPLDIIRLSENSVLRILASGSSANLTCSSLNPTQKSQASRPTAICARSSSLDSTIQNEVSRPNAIPVGSSATIFTVPNGTNHGRFQESRSTLARNRCQPPSFPRQSLGVRNNSIRRDRRNGAFTVGPQSYPSHMMSKGIGNVATQTVNHSAHGSPGRSNHNNPAEQDDRYHATTGLSNDRNQNGRNDIWLTTNFSSYPHSSSAQTSLNCVSGNAVTSKTQAFSQPLPQSYFSQNIDQSCNQGNEVPSNVACLNSNQYENEHQIGSYNEIASENIIQCGNPSQDTCQLQPNESNQIETTRKEDFSVFVASWTNNTSPSIEPLTESSHVQSSGFINEPPGIKESGVQFAGSTNLSDLDDIENWFFDTDSVPVTVDAAFPSELNIPSPDLGPIDTGLLLFDNENSWNGLAQAYFEKYAPSLKANQLVLVAKIRPCLDVVPLVRLSRSANCELEQRRMALWMEKGSEPLTESEKADLDAIAALKESAAIELKEKGNEYVKMGKKHYSDAIDCYTRAIDQKVLTDSENSVLFANRAHVNLLLGNYRRSLIDAEEAIKLCPSNIKAIYRAAKASLSLNLLAEAQSHCQNGLQLDPSNEELKKLGQQIDLKISEHEKHEAEVSKAVAETKELVSAIENRGLKMGKAMFRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFTVHLDMISFSINCFIYQPLPWDDKNNYKREFVELYYEAGSGVCLSKTKLIQCLLEGTAASHGESVGEDKDTVDDCNHVVTGTPKWIKVNERAKLHDVLKDPNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSI 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0795 1068 MobiDBLite consensus disorder prediction 375 411 - -
Glsi11g0795 1068 Pfam Cns1/TTC4 Wheel domain 903 975 IPR044059 GO:0051879
Glsi11g0795 1068 SUPERFAMILY TPR-like 725 863 IPR011990 GO:0005515
Glsi11g0795 1068 Coils Coil 844 864 - -
Glsi11g0795 1068 MobiDBLite consensus disorder prediction 1 23 - -
Glsi11g0795 1068 Gene3D Tetratricopeptide repeat domain 727 883 IPR011990 GO:0005515
Glsi11g0795 1068 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 700 1065 - -
Glsi11g0795 1068 SMART tpr_5 774 807 IPR019734 GO:0005515
Glsi11g0795 1068 SMART tpr_5 808 841 IPR019734 GO:0005515
Glsi11g0795 1068 SMART tpr_5 734 769 IPR019734 GO:0005515
Glsi11g0795 1068 MobiDBLite consensus disorder prediction 328 434 - -
Glsi11g0795 1068 MobiDBLite consensus disorder prediction 328 360 - -
Glsi11g0795 1068 CDD CTWD_Cns1-like 873 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0795 Glsi-ChrGlsi11 4981960 4991110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0795 733 864 Calmodulin-binding Proteins AT3G25230 31.469 1.53e-07 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0795 11 4981960 4991110 Glsi11g0795 11 4981960 4991110 ECH