Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0784 ATGTTTTATGTCGGAGAAACTTCCAATAAGTCCAAAGCTTCATCTGTCATTACTTGCTCATTACCAGCTGTTGCAATACCACTCCATAAACCTCACATGCCCTTAAAAATGACCAATACTAATCAATGGTGTTCATTGTGTTCTGTCCACCCCGACCTCACTCTTCTCCTTCAGTTTCAGTATAGTTCAAATGATAGACAGCCTAGAGATTATCTGAGCATAATGAAGAAGAACAAGATGCAATTGAAAACTCAGTTCTTCTTCTTCTTCTTCTTCTGTTACGTAGGTTGTTTTTCTTTTGGATTCGCTGCTGCCGTGAATGATGAAATATCTGTTTTACTTTCAATAAAAGCAGGTCTTTTTGATCCGCTGAATAGCCTGGGAGATTGGAAAGTGTTGGACAAAGCACCAGGGAAGGATGCAGCCCATTGTAACTGGACCGGTGTCTGGTGCAACTCTGATAGAGCTGTTGAGAAGCTTGATATCTCCCACATGAATCTCAGTGGCAGAGTATCCAATGAGATACAAAGCCTAAAAAGTCTCACTTCTCTCAACTTGTGCTGCAATGGGTTTTCGTCATCGTTGCCAAAATCCTTAGCCAATCTCACCACATTGAAGAGTCTTGATGTCAGTCAGAATTTGTTCATCGGAGAGTTTCCATTAGGCATTGGAAAGGCGTCGCGACTTATGACCTTAAATGCATCTAGCAATGATTTCTCAGGATTTCTGCCCGAGGACCTTGGAAACGCTTCCTCCTTAGAGATCCTGGATCTCAGAGGCAGCTTCTTTGAAGGGACAATTCCGAAATCCTTCAGTAACTTGCACAAGTTGAAGTTCCTTGGTCTTTCTGGAAATAATCTCACTGGCCAAATTCCAGGAGAGCTGGGACAGCTTTCATCACTGGAGTACATGATTCTTGGGTACAATGAACTCGAAGGTAGGATCCCAGCAGAGTTTGGAAATCTCACCAATCTTAAGTATCTTGATTTGGCAGTAGGCAGTTTTGGTGGTGAGATTCCATCTGAATTAGGAAAACTCAAGTTATTAGATACAATTTTCTTATACAAGAATAATTTTGAAGGCAGAATTCCATTAGCAGTTGGCAACATGACTTCGTTGCTGTTGCTGGATCTCTCTGACAATATATTATCAGGAACAATTCCAACTGATATAAGTCAGCTGAAGAATTTAGAGCTCCTGAATTTAATGCGCAACCAGTTATCTGGCACTGTGCCTTCTGGCATTGGGGATTTACCTCAATTGCAGGTGCTTGAACTATGGAACAATTCCTTGTCAGGGCAATTGCCTAGTAACCTTGGCAAGAATTCACCTTTGCAGTGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGGAACACTTTGCAGCCTGGGTAATCTCACCAAGCTCATACTTTTCGATAATGCCTTCTCGGGTCCAATTCCGACTAGCCTATCAACATGTCCTTCCCTAGTTCGTGTTCGAATTCAGAACAATTTTCTTTCTGGAACAATTCCAGTTGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAACAATAATCTCACTGGTGAAATTCCCGATGACGTTGTTACTTCCACTTCCCTTTCTTTCATTGATTTCTCCAAAAACAACCTCCATTCTTCTCTTCCTTCCACCATTCTTTCCATTTCAAATCTGCAAACCTTCATGGCCTCTAACAACGACTTGGAAGGTGAAATCCCAGGCCAATTCCAGGACTGTCCCTCACTTAGCGTTCTTGATCTCTCATCAAATCGTTTCTCTGGAAGCATCCCAGCAAGCATCGCTTCATGTCAGAAATTGGTAGATTTGAACCTTAAAAACAATCAATTGACTGGTGAAATACCAAAAGCAATAGCTAACATGCCTACGTTGGCCATTCTTGATCTTTCCAACAACTCTCTGACTGGTCAAATACCCGAAAACTTCGGTATTTCTCCAGCTCTGGAAGCACTCAATGTTTCATACAACAAGCTGGAGGGTCCTGTCCCATCAAATGGCGTGCTAAGAACAATAAACCCAAACGATCTCGTGGGCAATGCTGGCCTATGTGGTGGTGTCCTCCTTCCGTGTGGTGAAAACTCTGCATATACGTTAAGGCATGGAAGCACACGTGCAAAGCACCTTCTTGCAGGATGGATCATCGGCATATCATCAGTCTTAGCCATTGGAATTGCAATTTTGGTTGCTAGATCTTTATACAGAAGGCGGTATTCTGATGGTTTCTGCTTTGGAGAAAGATTTTATAAGGGTAACAATGGTTGGCCCTGGAGATTGATGGCATTTCAGAGGCTGGGTTTTACAAGTACTGACATTCTAGCTTGCATCAAAGAAACAAACGTGATTGGAATGGGAGCAACTGGGATTGTTTATAAGGCTGAAATACCCCAATCCAATACAACTGTAGCTGTGAAAAAGTTGTGGAGATCAGGATATGATATTGAAGCCGGAAGCAGTGATGAACTTGTTGGAGAGGTAAATCTTTTAGGGAGGCTACGACATAGGAACATTGTTAGACTACTAGGATTTCTTCATAACGACACTGATGTGATGATAGTTTATGAATTTATGCACCATGGCAACCTTGGAGATGCCTTGCATGGCAAACAAGCAGGGAGGTTGCTTGTTGACTGGGTTTCCCGGTACAACATAGCTCTAGGAATTGCACATGGACTAGCTTATCTTCATCATGACTGTCATCCACCCGTTATCCATCGAGATATAAAGTCAAATAACATACTGCTTGATGCAAATATTGAGGCAAGGATTGCAGATTTTGGGTTAGCCAAAATGATGATCCGGAAGAATGAAACAGTCTCCATGGTTGCTGGGTCCTATGGTTACATTGCCCCTGAATACGGATACACGTTGAAGGTGGATGAGAAGATTGATATTTACAGTTATGGAGTAGTTCTTTTGGAGCTTATCACAGGAAAGAGGCCCTTAGATCCTGAGTTTGGAGAATCTGTAGACATTGTAGAGTGGATTAGAAGGAAGATTAGAGACAACAAATCTCTAGAAGGAACATTAGACCCCAGTGTAGGAAACTGCAGCCATGTTCAAGAAGAGATGCTCTTAGTTCTCAGAATTGCACTTCTTTGCACTGCCAGGCTCCCTAAGGACAGACCCAGCATGAGGGATGTCATAATGATGCTCGGAGAGGCAAAACCTCGGAGAAAAAGCAGTAGCAACAACAATGAAACCTTTGCATCTAACAAAGAGATGCCAGTTTTTAGCGCATCACCAGTTAATGGTCTTTTGTAA 3300 0.4239 MFYVGETSNKSKASSVITCSLPAVAIPLHKPHMPLKMTNTNQWCSLCSVHPDLTLLLQFQYSSNDRQPRDYLSIMKKNKMQLKTQFFFFFFFCYVGCFSFGFAAAVNDEISVLLSIKAGLFDPLNSLGDWKVLDKAPGKDAAHCNWTGVWCNSDRAVEKLDISHMNLSGRVSNEIQSLKSLTSLNLCCNGFSSSLPKSLANLTTLKSLDVSQNLFIGEFPLGIGKASRLMTLNASSNDFSGFLPEDLGNASSLEILDLRGSFFEGTIPKSFSNLHKLKFLGLSGNNLTGQIPGELGQLSSLEYMILGYNELEGRIPAEFGNLTNLKYLDLAVGSFGGEIPSELGKLKLLDTIFLYKNNFEGRIPLAVGNMTSLLLLDLSDNILSGTIPTDISQLKNLELLNLMRNQLSGTVPSGIGDLPQLQVLELWNNSLSGQLPSNLGKNSPLQWLDVSSNSLSGEIPGTLCSLGNLTKLILFDNAFSGPIPTSLSTCPSLVRVRIQNNFLSGTIPVGLGKLGKLQRLELANNNLTGEIPDDVVTSTSLSFIDFSKNNLHSSLPSTILSISNLQTFMASNNDLEGEIPGQFQDCPSLSVLDLSSNRFSGSIPASIASCQKLVDLNLKNNQLTGEIPKAIANMPTLAILDLSNNSLTGQIPENFGISPALEALNVSYNKLEGPVPSNGVLRTINPNDLVGNAGLCGGVLLPCGENSAYTLRHGSTRAKHLLAGWIIGISSVLAIGIAILVARSLYRRRYSDGFCFGERFYKGNNGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGIVYKAEIPQSNTTVAVKKLWRSGYDIEAGSSDELVGEVNLLGRLRHRNIVRLLGFLHNDTDVMIVYEFMHHGNLGDALHGKQAGRLLVDWVSRYNIALGIAHGLAYLHHDCHPPVIHRDIKSNNILLDANIEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELITGKRPLDPEFGESVDIVEWIRRKIRDNKSLEGTLDPSVGNCSHVQEEMLLVLRIALLCTARLPKDRPSMRDVIMMLGEAKPRRKSSSNNNETFASNKEMPVFSASPVNGLL 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0784 1099 Pfam Leucine rich repeat N-terminal domain 107 152 IPR013210 -
Glsi11g0784 1099 ProSiteProfiles Protein kinase domain profile. 788 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0784 1099 Pfam Leucine rich repeat 612 671 IPR001611 GO:0005515
Glsi11g0784 1099 Pfam Leucine rich repeat 419 478 IPR001611 GO:0005515
Glsi11g0784 1099 Gene3D Ribonuclease Inhibitor 108 224 IPR032675 -
Glsi11g0784 1099 FunFam MDIS1-interacting receptor like kinase 1 788 872 - -
Glsi11g0784 1099 Gene3D Ribonuclease Inhibitor 225 314 IPR032675 -
Glsi11g0784 1099 SUPERFAMILY RNI-like 306 657 - -
Glsi11g0784 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Glsi11g0784 1099 PANTHER UNNAMED PRODUCT 252 997 - -
Glsi11g0784 1099 Gene3D Transferase(Phosphotransferase) domain 1 873 1089 - -
Glsi11g0784 1099 SUPERFAMILY L domain-like 142 389 - -
Glsi11g0784 1099 Gene3D Phosphorylase Kinase; domain 1 788 872 - -
Glsi11g0784 1099 FunFam MDIS1-interacting receptor like kinase 1 873 1083 - -
Glsi11g0784 1099 SMART serkin_6 788 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0784 1099 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 262 362 - -
Glsi11g0784 1099 Pfam Protein kinase domain 790 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0784 1099 Gene3D Ribonuclease Inhibitor 414 710 IPR032675 -
Glsi11g0784 1099 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 106 261 - -
Glsi11g0784 1099 FunFam Leucine-rich repeat receptor protein kinase EMS1 363 446 - -
Glsi11g0784 1099 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 447 707 - -
Glsi11g0784 1099 SUPERFAMILY Protein kinase-like (PK-like) 784 1064 IPR011009 -
Glsi11g0784 1099 SMART LRR_typ_2 370 394 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 586 610 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 466 490 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 514 538 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 634 658 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 178 201 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 274 298 IPR003591 -
Glsi11g0784 1099 SMART LRR_typ_2 418 442 IPR003591 -
Glsi11g0784 1099 Gene3D Ribonuclease Inhibitor 315 413 IPR032675 -
Glsi11g0784 1099 ProSitePatterns Protein kinases ATP-binding region signature. 794 818 IPR017441 GO:0005524
Glsi11g0784 1099 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0784 Glsi-ChrGlsi11 4912922 4916490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0784 88 1099 Receptor kinase-like Gene Family AT1G08590 60.445 0.0 1200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi11g0784 Pkinase 4.5e-46 CL0016